1cgm: Difference between revisions

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{{Seed}}
[[Image:1cgm.png|left|200px]]


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==STRUCTURE DETERMINATION OF CUCUMBER GREEN MOTTLE MOSAIC VIRUS BY X-RAY FIBER DIFFRACTION. SIGNIFICANCE FOR THE EVOLUTION OF TOBAMOVIRUSES==
The line below this paragraph, containing "STRUCTURE_1cgm", creates the "Structure Box" on the page.
<StructureSection load='1cgm' size='340' side='right'caption='[[1cgm]], [[Resolution|resolution]] 3.40&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1cgm]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Cucumber_green_mottle_mosaic_virus Cucumber green mottle mosaic virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1CGM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1CGM FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Fiber diffraction, [[Resolution|Resolution]] 3.4&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene></td></tr>
{{STRUCTURE_1cgm|  PDB=1cgm |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1cgm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1cgm OCA], [https://pdbe.org/1cgm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1cgm RCSB], [https://www.ebi.ac.uk/pdbsum/1cgm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1cgm ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/CAPSD_CGMVW CAPSD_CGMVW] Capsid protein self-assembles to form rod-shaped virions about 18 nm in diameter with a central canal enclosing the viral genomic RNA.
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cg/1cgm_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1cgm ConSurf].
<div style="clear:both"></div>


===STRUCTURE DETERMINATION OF CUCUMBER GREEN MOTTLE MOSAIC VIRUS BY X-RAY FIBER DIFFRACTION. SIGNIFICANCE FOR THE EVOLUTION OF TOBAMOVIRUSES===
==See Also==
 
*[[Virus coat proteins 3D structures|Virus coat proteins 3D structures]]
 
__TOC__
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</StructureSection>
The line below this paragraph, {{ABSTRACT_PUBMED_8201619}}, adds the Publication Abstract to the page
(as it appears on PubMed at http://www.pubmed.gov), where 8201619 is the PubMed ID number.
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{{ABSTRACT_PUBMED_8201619}}
 
==About this Structure==
1CGM is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Cucumber_green_mottle_mosaic_virus Cucumber green mottle mosaic virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1CGM OCA].
 
==Reference==
<ref group="xtra">PMID:8201619</ref><references group="xtra"/>
[[Category: Cucumber green mottle mosaic virus]]
[[Category: Cucumber green mottle mosaic virus]]
[[Category: Stubbs, G.]]
[[Category: Large Structures]]
[[Category: Wang, H.]]
[[Category: Stubbs G]]
[[Category: Helical virus]]
[[Category: Wang H]]
[[Category: Virus]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Sep 21 19:33:26 2009''
Retrieved from "https://proteopedia.org/1cgm"