2avp: Difference between revisions

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{{Seed}}
[[Image:2avp.png|left|200px]]


<!--
==Crystal structure of an 8 repeat consensus TPR superhelix==
The line below this paragraph, containing "STRUCTURE_2avp", creates the "Structure Box" on the page.
<StructureSection load='2avp' size='340' side='right'caption='[[2avp]], [[Resolution|resolution]] 2.04&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2avp]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2AVP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2AVP FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.04&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CD:CADMIUM+ION'>CD</scene></td></tr>
{{STRUCTURE_2avp|  PDB=2avp  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2avp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2avp OCA], [https://pdbe.org/2avp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2avp RCSB], [https://www.ebi.ac.uk/pdbsum/2avp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2avp ProSAT]</span></td></tr>
 
</table>
===Crystal structure of an 8 repeat consensus TPR superhelix===
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
 
Check<jmol>
<!--
  <jmolCheckbox>
The line below this paragraph, {{ABSTRACT_PUBMED_17582171}}, adds the Publication Abstract to the page
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/av/2avp_consurf.spt"</scriptWhenChecked>
(as it appears on PubMed at http://www.pubmed.gov), where 17582171 is the PubMed ID number.
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-->
    <text>to colour the structure by Evolutionary Conservation</text>
{{ABSTRACT_PUBMED_17582171}}
  </jmolCheckbox>
 
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2avp ConSurf].
==About this Structure==
<div style="clear:both"></div>
2AVP is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2AVP OCA].  
__TOC__
 
</StructureSection>
==Reference==
[[Category: Large Structures]]
<ref group="xtra">PMID:17582171</ref><ref group="xtra">PMID:16028928</ref><references group="xtra"/>
[[Category: Cortajarena AL]]
[[Category: Cortajarena, A L.]]
[[Category: Kajander T]]
[[Category: Kajander, T.]]
[[Category: Main ER]]
[[Category: Main, E R.]]
[[Category: Mochrie S]]
[[Category: Mochrie, S.]]
[[Category: Regan L]]
[[Category: Regan, L.]]
[[Category: Consensus protein]]
[[Category: De novo protein]]
[[Category: Superhelix]]
[[Category: Tetratricopeptide repeat]]
[[Category: Tpr]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Sep 23 08:21:00 2009''
Retrieved from "https://proteopedia.org/2avp"