2kmm: Difference between revisions
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==Solution NMR structure of the TGS domain of PG1808 from Porphyromonas gingivalis. Northeast Structural Genomics Consortium Target PgR122A (418-481)== | |||
<StructureSection load='2kmm' size='340' side='right'caption='[[2kmm]]' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[2kmm]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Porphyromonas_gingivalis Porphyromonas gingivalis]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KMM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2KMM FirstGlance]. <br> | |||
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2kmm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kmm OCA], [https://pdbe.org/2kmm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2kmm RCSB], [https://www.ebi.ac.uk/pdbsum/2kmm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2kmm ProSAT]</span></td></tr> | |||
</table> | |||
== Function == | |||
[https://www.uniprot.org/uniprot/Q7MAV5_PORGI Q7MAV5_PORGI] In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance (By similarity).[RuleBase:RU003847] | |||
== Evolutionary Conservation == | |||
[[Image:Consurf_key_small.gif|200px|right]] | |||
Check<jmol> | |||
<jmolCheckbox> | |||
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/km/2kmm_consurf.spt"</scriptWhenChecked> | |||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |||
<text>to colour the structure by Evolutionary Conservation</text> | |||
</jmolCheckbox> | |||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2kmm ConSurf]. | |||
<div style="clear:both"></div> | |||
__TOC__ | |||
</StructureSection> | |||
[[Category: Large Structures]] | |||
[[Category: Porphyromonas gingivalis]] | |||
[[Category: Acton TB]] | |||
[[Category: Ciccosanti C]] | |||
[[Category: Cort JR]] | |||
[[Category: Everett JK]] | |||
[[Category: Hamilton K]] | |||
[[Category: Kennedy MA]] | |||
[[Category: Lee D]] | |||
[[Category: Montelione GT]] | |||
[[Category: Nair R]] | |||
[[Category: Ramelot TA]] | |||
[[Category: Rost B]] | |||
[[Category: Swapna G]] | |||
[[Category: Xiao R]] | |||
[[Category: Yang Y]] | |||
Latest revision as of 09:40, 22 May 2024
Solution NMR structure of the TGS domain of PG1808 from Porphyromonas gingivalis. Northeast Structural Genomics Consortium Target PgR122A (418-481)
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