1t35: Difference between revisions

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New page: left|200px<br /><applet load="1t35" size="450" color="white" frame="true" align="right" spinBox="true" caption="1t35, resolution 2.72Å" /> '''CRYSTAL STRUCTURE OF...
 
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[[Image:1t35.gif|left|200px]]<br /><applet load="1t35" size="450" color="white" frame="true" align="right" spinBox="true"
caption="1t35, resolution 2.72&Aring;" />
'''CRYSTAL STRUCTURE OF A HYPOTHETICAL PROTEIN YVDD- A PUTATIVE LYSINE DECARBOXYLASE'''<br />


==About this Structure==
==CRYSTAL STRUCTURE OF A HYPOTHETICAL PROTEIN YVDD- A PUTATIVE LYSINE DECARBOXYLASE==
1T35 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis] with SO4 as [http://en.wikipedia.org/wiki/ligand ligand]. Active as [http://en.wikipedia.org/wiki/Lysine_decarboxylase Lysine decarboxylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.1.18 4.1.1.18] Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1T35 OCA].  
<StructureSection load='1t35' size='340' side='right'caption='[[1t35]], [[Resolution|resolution]] 2.72&Aring;' scene=''>
[[Category: Bacillus subtilis]]
== Structural highlights ==
[[Category: Lysine decarboxylase]]
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1T35 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1T35 FirstGlance]. <br>
[[Category: Single protein]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.72&#8491;</td></tr>
[[Category: Burley, S.K.]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
[[Category: Kniewel, R.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1t35 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1t35 OCA], [https://pdbe.org/1t35 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1t35 RCSB], [https://www.ebi.ac.uk/pdbsum/1t35 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1t35 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/1t35 TOPSAN]</span></td></tr>
[[Category: Lima, C.D.]]
</table>
[[Category: NYSGXRC, New.York.Structural.GenomiX.Research.Consortium.]]
== Evolutionary Conservation ==
[[Category: Rajashankar, K.R.]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: Solorzano, V.]]
Check<jmol>
[[Category: SO4]]
  <jmolCheckbox>
[[Category: hypothetical protein yvdd]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/t3/1t35_consurf.spt"</scriptWhenChecked>
[[Category: new york structural genomix research consortium]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: nysgxrc]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: protein structure initiative]]
  </jmolCheckbox>
[[Category: psi]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1t35 ConSurf].
[[Category: putative lysine decarboxylase]]
<div style="clear:both"></div>
[[Category: structural genomics target]]
__TOC__
[[Category: t833]]
</StructureSection>
 
[[Category: Large Structures]]
''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Sun Nov 25 01:34:19 2007''
[[Category: Burley SK]]
[[Category: Kniewel R]]
[[Category: Lima CD]]
[[Category: Rajashankar KR]]
[[Category: Solorzano V]]