1p1y: Difference between revisions

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New page: left|200px<br /><applet load="1p1y" size="450" color="white" frame="true" align="right" spinBox="true" caption="1p1y, resolution 2.10Å" /> '''Crystal structure of...
 
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[[Image:1p1y.gif|left|200px]]<br /><applet load="1p1y" size="450" color="white" frame="true" align="right" spinBox="true"  
[[Image:1p1y.gif|left|200px]]<br /><applet load="1p1y" size="350" color="white" frame="true" align="right" spinBox="true"  
caption="1p1y, resolution 2.10&Aring;" />
caption="1p1y, resolution 2.10&Aring;" />
'''Crystal structure of a continuous three-dimensional DNA lattice from d(GGACAGATGGGAG)'''<br />
'''Crystal structure of a continuous three-dimensional DNA lattice from d(GGACAGATGGGAG)'''<br />


==Overview==
==Overview==
DNA has proved to be a versatile material for the rational design and, assembly of nanometer scale objects. Here we report the crystal structure, of a continuous three-dimensional DNA lattice formed by the self-assembly, of a DNA 13-mer. The structure consists of stacked layers of parallel, helices with adjacent layers linked through parallel-stranded base, pairing. The hexagonal lattice geometry contains solvent channels that, appear large enough to allow 3'-linked guest molecules into the crystal., We have successfully used these parallel base pairs to design and produce, crystals with greatly enlarged solvent channels. This lattice may have, applications as a molecular scaffold for structure determination of guest, molecules, as a molecular sieve, or in the assembly of molecular, electronics. Predictable non-Watson-Crick base pairs, like those described, here, may present a new tool in structural DNA nanotechnology.
DNA has proved to be a versatile material for the rational design and assembly of nanometer scale objects. Here we report the crystal structure of a continuous three-dimensional DNA lattice formed by the self-assembly of a DNA 13-mer. The structure consists of stacked layers of parallel helices with adjacent layers linked through parallel-stranded base pairing. The hexagonal lattice geometry contains solvent channels that appear large enough to allow 3'-linked guest molecules into the crystal. We have successfully used these parallel base pairs to design and produce crystals with greatly enlarged solvent channels. This lattice may have applications as a molecular scaffold for structure determination of guest molecules, as a molecular sieve, or in the assembly of molecular electronics. Predictable non-Watson-Crick base pairs, like those described here, may present a new tool in structural DNA nanotechnology.


==About this Structure==
==About this Structure==
1P1Y is a [http://en.wikipedia.org/wiki/Protein_complex Protein complex] structure of sequences from [http://en.wikipedia.org/wiki/ ] with MG as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1P1Y OCA].  
1P1Y is a [http://en.wikipedia.org/wiki/Protein_complex Protein complex] structure of sequences from [http://en.wikipedia.org/wiki/ ] with <scene name='pdbligand=MG:'>MG</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1P1Y OCA].  


==Reference==
==Reference==
Crystal structure of a continuous three-dimensional DNA lattice., Paukstelis PJ, Nowakowski J, Birktoft JJ, Seeman NC, Chem Biol. 2004 Aug;11(8):1119-26. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=15324813 15324813]
Crystal structure of a continuous three-dimensional DNA lattice., Paukstelis PJ, Nowakowski J, Birktoft JJ, Seeman NC, Chem Biol. 2004 Aug;11(8):1119-26. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=15324813 15324813]
[[Category: Protein complex]]
[[Category: Protein complex]]
[[Category: Birktoft, J.J.]]
[[Category: Birktoft, J J.]]
[[Category: Nowakowski, J.]]
[[Category: Nowakowski, J.]]
[[Category: Paukstelis, P.J.]]
[[Category: Paukstelis, P J.]]
[[Category: Seeman, N.C.]]
[[Category: Seeman, N C.]]
[[Category: MG]]
[[Category: MG]]
[[Category: continuous three-dimensional dna lattice]]
[[Category: continuous three-dimensional dna lattice]]
[[Category: parallel-stranded base pairs]]
[[Category: parallel-stranded base pairs]]


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