3kyg: Difference between revisions
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{{STRUCTURE_3kyg| PDB=3kyg | SCENE= }} | {{STRUCTURE_3kyg| PDB=3kyg | SCENE= }} | ||
===Crystal structure of VCA0042 (L135R) complexed with c-di-GMP=== | ===Crystal structure of VCA0042 (L135R) complexed with c-di-GMP=== | ||
{{ABSTRACT_PUBMED_20226196}} | |||
==Function== | |||
[[http://www.uniprot.org/uniprot/Q9KNC3_VIBCH Q9KNC3_VIBCH]] May act as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)-dependent manner. Increasing levels of c-di-GMP lead to decreased motility (Potential). Binds bis-(3'-5') cyclic diguanylic acid (c-di-GMP) with a dissociation constant of 170 nM in the presence of 10 mM KCl and with 100 mM in its absence.[HAMAP-Rule:MF_01457] | |||
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==About this Structure== | ==About this Structure== | ||
[[3kyg]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Vibrio_cholerae Vibrio cholerae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KYG OCA]. | |||
==Reference== | ==Reference== | ||
<ref group="xtra">PMID: | <ref group="xtra">PMID:020226196</ref><references group="xtra"/><references/> | ||
[[Category: Vibrio cholerae]] | [[Category: Vibrio cholerae]] | ||
[[Category: Choi, B S.]] | [[Category: Choi, B S.]] | ||
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[[Category: Unknown function]] | [[Category: Unknown function]] | ||
[[Category: Vca0042]] | [[Category: Vca0042]] | ||
Revision as of 20:40, 4 April 2013
Crystal structure of VCA0042 (L135R) complexed with c-di-GMP
Template:ABSTRACT PUBMED 20226196
Function
[Q9KNC3_VIBCH] May act as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)-dependent manner. Increasing levels of c-di-GMP lead to decreased motility (Potential). Binds bis-(3'-5') cyclic diguanylic acid (c-di-GMP) with a dissociation constant of 170 nM in the presence of 10 mM KCl and with 100 mM in its absence.[HAMAP-Rule:MF_01457]
About this Structure
3kyg is a 2 chain structure with sequence from Vibrio cholerae. Full crystallographic information is available from OCA.
Reference
- Ko J, Ryu KS, Kim H, Shin JS, Lee JO, Cheong C, Choi BS. Structure of PP4397 reveals the molecular basis for different c-di-GMP binding modes by Pilz domain proteins. J Mol Biol. 2010 Apr 23;398(1):97-110. Epub 2010 Mar 10. PMID:20226196 doi:10.1016/j.jmb.2010.03.007
