1qj4: Difference between revisions
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[[Image:1qj4.jpg|left|200px]]<br /><applet load="1qj4" size=" | [[Image:1qj4.jpg|left|200px]]<br /><applet load="1qj4" size="350" color="white" frame="true" align="right" spinBox="true" | ||
caption="1qj4, resolution 1.10Å" /> | caption="1qj4, resolution 1.10Å" /> | ||
'''HYDROXYNITRILE-LYASE FROM HEVEA BRASILIENSIS AT ATOMIC RESOLUTION'''<br /> | '''HYDROXYNITRILE-LYASE FROM HEVEA BRASILIENSIS AT ATOMIC RESOLUTION'''<br /> | ||
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==About this Structure== | ==About this Structure== | ||
1QJ4 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Hevea_brasiliensis Hevea brasiliensis] with SO4 and GOL as [http://en.wikipedia.org/wiki/ligands ligands]. Active as [http://en.wikipedia.org/wiki/Gluconate_dehydratase Gluconate dehydratase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.1.39 4.2.1.39] Known structural/functional Site: <scene name='pdbsite=CAT:Catalytic Triad'>CAT</scene>. Full crystallographic information is available from [http:// | 1QJ4 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Hevea_brasiliensis Hevea brasiliensis] with <scene name='pdbligand=SO4:'>SO4</scene> and <scene name='pdbligand=GOL:'>GOL</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Active as [http://en.wikipedia.org/wiki/Gluconate_dehydratase Gluconate dehydratase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.1.39 4.2.1.39] Known structural/functional Site: <scene name='pdbsite=CAT:Catalytic+Triad'>CAT</scene>. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1QJ4 OCA]. | ||
==Reference== | ==Reference== | ||
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[[Category: oxynitrilase]] | [[Category: oxynitrilase]] | ||
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Revision as of 08:00, 3 February 2008
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HYDROXYNITRILE-LYASE FROM HEVEA BRASILIENSIS AT ATOMIC RESOLUTION
Overview
The X-ray crystal structure of native hydroxynitrile lyase from Hevea, brasiliensis (Hb-HNL) has been determined at 1.1 A resolution. It refined, to a final R of 11.5% for all data and an Rfree of 14.4%. The favorable, data-to-parameter ratio at atomic resolution made the refinement of, individual anisotropic displacement parameters possible. The data also, allowed a clear distinction of the alternate orientations of all histidine, and the majority of asparagine and glutamine side chains. A number of, hydrogen atoms, including one on the imidazole of the mechanistically, important His-235, became visible as peaks in a difference electron, density map. The structure revealed a discretely disordered sidechain of, Ser-80, which is part of the putative catalytic triad. Analysis of the, anisotropy indicated an increased mobility of residues near the entrance, to the active site and within the active site.
About this Structure
1QJ4 is a Single protein structure of sequence from Hevea brasiliensis with SO4 and GOL as ligands. Active as Gluconate dehydratase, with EC number 4.2.1.39 Known structural/functional Site: CAT. Full crystallographic information is available from OCA.
Reference
Atomic resolution crystal structure of hydroxynitrile lyase from Hevea brasiliensis., Gruber K, Gugganig M, Wagner UG, Kratky C, Biol Chem. 1999 Jul-Aug;380(7-8):993-1000. PMID:10494852
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