User:Wayne Decatur/3kg2 Morph Methods: Difference between revisions
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Used [http://molmovdb.org/cgi-bin/beta.cgi Beta server] - mainly because it allows turning off fitting so I can show relationship (symmetry operations until the SYMOP functions within Jmol work within Proteopedia when newer version added) of identical conformations, left fitting on for showing difference between chain A and chain B. | Used [http://molmovdb.org/cgi-bin/beta.cgi Beta server] - mainly because it allows turning off fitting so I can show relationship (symmetry operations until the SYMOP functions within Jmol work within Proteopedia when newer version added) of identical conformations, left fitting on for showing difference between chain A and chain B. | ||
==TRYING TO GET TO LOAD WITH VIEW ALREADY CLOSE TO WHAT I WANT WHEN | ==TRYING TO GET TO LOAD WITH VIEW ALREADY CLOSE TO WHAT I WANT WHEN LOADED FILE OPENED IN PROTEOPEDIA== | ||
===In PyMol=== | ===In PyMol=== | ||
Next I was trying to get the subunit A to B morph to load already close to the familiar arrangement, so I tried in PyMol to orient it like I wanted it and then save all states (just fyi...found I could show all states at same time on screen with 'set all_states,1' from - PyMol reference card - 'set all_states,0' turns it back to one frame only shown). | Next I was trying to get the subunit A to B morph to load already close to the familiar arrangement, so I tried in PyMol to orient it like I wanted it and then save all states (just fyi...found I could show all states at same time on screen with 'set all_states,1' from - PyMol reference card - 'set all_states,0' turns it back to one frame only shown). | ||
