Michael Pikaart/Biochem StructureIntro: Difference between revisions

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New page: 100px Chem311 Course Page 1 - Introduction to protein structure
 
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[[Image:Gata_dna.jpg|100px]] Chem311 Course Page 1 - Introduction to protein structure
[[Image:Gata_dna.jpg|100px]] <big>Chem311 Course Page 1 Introduction to protein structure</big>
 
 
== Introduction ==
A protein's function depends on the proper folding of the linear polymeric chain of amino acids making up its polypeptide sequence.  Folding of a polypeptide occurs by way of rotation of the single bonds in either side of each amino acid residue's alpha carbon, characterized by the &Phi; and &Psi; angles.  In folded proteins, stretches of amino acids typically have a re-iterated and restricted set of &Phi; and &Psi; angles, giving rise to a length of stable secondary structure.  If this structure has a rotational displacement, the result is a helical secondary structure; if the structure occurs in a zig-zag arrangement, a sheet secondary structure results.  Here we will explore these two types of secondary structures, as found in actual proteins.
 
== Alpha helix ==
Helix or screw structures are found in lots of contexts, both in nature and in man-made objects.