Structure superposition tools: Difference between revisions
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Eric Martz (talk | contribs) |
Eric Martz (talk | contribs) |
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* Color, RMS: colors the target structure by deviation. | * Color, RMS: colors the target structure by deviation. | ||
* Fit, Set Layer Std Dev. into B-factors: works only when the sequences of the aligned models are identical. | * Fit, Set Layer Std Dev. into B-factors: works only when the sequences of the aligned models are identical. | ||
===PyMOL=== | |||
*Download site: [http://www.pymol.org/ PyMOL.Org] | |||
*The ''super'' command does structural alignment. | |||
*Color by RMSD: YES [http://www.pymolwiki.org/index.php/ColorByRMSD example]. | |||
==Examples== | ==Examples== | ||