Sandbox 46: Difference between revisions

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<applet load='1QLQ' size='300' frame='true' align='right' caption='Trypsin' />
<applet load='1QLQ' size='300' frame='true' align='right' caption='Trypsin' />
=Trypsin=
Trypsin, a member of the serine protease family, is produced in the pancreas and found in the digestive tracks of vertebrates.  To avoid pancreatic self-degradation, trypsin is synthesized as trypsinogen, a zymogen.  Cleavage by enteropeptidase allows tryspin to enter its active form.  As a serine protease, trypsin contains a serine residue in its active site.  such, it contains a serine residue in the active site. 


= Structure=
==Structure==


To follow the primary structure (amino acid sequence) of Trypsin, click <scene name='Sandbox_46/Secondary_structure_tryp/2'>here.</scene>  The N-terminus is blue and the C-terminus is red.
To follow the primary structure (amino acid sequence) of Trypsin, click <scene name='Sandbox_46/Secondary_structure_tryp/2'>here.</scene>  The N-terminus is blue and the C-terminus is red.

Revision as of 01:51, 29 October 2010

Trypsin

Drag the structure with the mouse to rotate

Trypsin

Trypsin, a member of the serine protease family, is produced in the pancreas and found in the digestive tracks of vertebrates. To avoid pancreatic self-degradation, trypsin is synthesized as trypsinogen, a zymogen. Cleavage by enteropeptidase allows tryspin to enter its active form. As a serine protease, trypsin contains a serine residue in its active site. such, it contains a serine residue in the active site.

Structure

To follow the primary structure (amino acid sequence) of Trypsin, click here. The N-terminus is blue and the C-terminus is red.


The secondary structure of Trypsin consists of two alpha helices (light green) and two beta sheets (peach). The yellow and red molecules are not part of the Trypsin structure; they were added during crystallization to freeze Trypsin in a specific conformation. Fix THIS. they bind at active site


polar vs. nonpolar

Wire


Disulfide

DS bonds labeled

Active Site 1

Active Site 2

Active Site 3

Active Site 4

All active sites Shared active site

H bonds backbone

H bonds r groups