2jbj: Difference between revisions
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==Overview== | ==Overview== | ||
Human glutamate carboxypeptidase II (GCPII) occurs in the central nervous, system as well as in human prostate (where it is called prostate-specific, membrane antigen; PSMA). Inhibitors of the enzyme have been shown to, provide neuroprotection, but may also be useful for the detection, imaging, and treatment of prostate cancer. Crystal structures were determined of, the extracellular part of GCPII (amino-acid residues 44-750) in complex, with two potent inhibitors, quisqualate and 2-PMPA (the strongest GCPII, inhibitor to date), at resolutions of 3.0 and 2.2 A, respectively. In, addition, models were constructed for binding of the inhibitors, willardiine, homoibotenate, L-2-amino-4-phosphonobutanoic acid and, L-serine-O-sulfate to the S1' site of the enzyme. The common denominator, for high-affinity binding to the S1' site is the formation of two strong, salt bridges. | Human glutamate carboxypeptidase II (GCPII) occurs in the central nervous, system as well as in human prostate (where it is called prostate-specific, membrane antigen; PSMA). Inhibitors of the enzyme have been shown to, provide neuroprotection, but may also be useful for the detection, imaging, and treatment of prostate cancer. Crystal structures were determined of, the extracellular part of GCPII (amino-acid residues 44-750) in complex, with two potent inhibitors, quisqualate and 2-PMPA (the strongest GCPII, inhibitor to date), at resolutions of 3.0 and 2.2 A, respectively. In, addition, models were constructed for binding of the inhibitors, willardiine, homoibotenate, L-2-amino-4-phosphonobutanoic acid and, L-serine-O-sulfate to the S1' site of the enzyme. The common denominator, for high-affinity binding to the S1' site is the formation of two strong, salt bridges. | ||
==Disease== | |||
Known diseases associated with this structure: Myocardial infarcation, susceptibility to OMIM:[[http://www.ncbi.nlm.nih.gov/entrez/dispomim.cgi?id=602855 602855]] | |||
==About this Structure== | ==About this Structure== | ||
2JBJ is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] with <scene name='pdbligand=NAG:'>NAG</scene>, <scene name='pdbligand=ZN:'>ZN</scene>, <scene name='pdbligand=CA:'>CA</scene>, <scene name='pdbligand=CL:'>CL</scene> and <scene name='pdbligand=G88:'>G88</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Active as [http://en.wikipedia.org/wiki/Glutamate_carboxypeptidase_II Glutamate carboxypeptidase II], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.17.21 3.4.17.21] Known structural/functional Sites: <scene name='pdbsite=AC1:Zn Binding Site For Chain A'>AC1</scene>, <scene name='pdbsite=AC2:Zn Binding Site For Chain A'>AC2</scene>, <scene name='pdbsite=AC3:Ca Binding Site For Chain A'>AC3</scene>, <scene name='pdbsite=AC4:Cl Binding Site For Chain A'>AC4</scene>, <scene name='pdbsite=AC5:Nag Binding Site For Chain A'>AC5</scene>, <scene name='pdbsite=AC6:Nag Binding Site For Chain A'>AC6</scene>, <scene name='pdbsite=AC7:Nag Binding Site For Chain A'>AC7</scene>, <scene name='pdbsite=AC8:Nag Binding Site For Chain A'>AC8</scene>, <scene name='pdbsite=BC1:Nag Binding Site For Chain A'>BC1</scene>, <scene name='pdbsite=BC2:Nag Binding Site For Chain A'>BC2</scene>, <scene name='pdbsite=BC3:Nag Binding Site For Chain A'>BC3</scene>, <scene name='pdbsite=BC4:Nag Binding Site For Chain A'>BC4</scene>, <scene name='pdbsite=BC5:Nag Binding Site For Chain A'>BC5</scene>, <scene name='pdbsite=BC6:Nag Binding Site For Chain A'>BC6</scene>, <scene name='pdbsite=BC7:Bma Binding Site For Chain A'>BC7</scene>, <scene name='pdbsite=BC8:Man Binding Site For Chain A'>BC8</scene> and <scene name='pdbsite=BC9:G88 Binding Site For Chain A'>BC9</scene>. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JBJ OCA]. | 2JBJ is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] with <scene name='pdbligand=NAG:'>NAG</scene>, <scene name='pdbligand=ZN:'>ZN</scene>, <scene name='pdbligand=CA:'>CA</scene>, <scene name='pdbligand=CL:'>CL</scene> and <scene name='pdbligand=G88:'>G88</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Active as [http://en.wikipedia.org/wiki/Glutamate_carboxypeptidase_II Glutamate carboxypeptidase II], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.17.21 3.4.17.21] Known structural/functional Sites: <scene name='pdbsite=AC1:Zn+Binding+Site+For+Chain+A'>AC1</scene>, <scene name='pdbsite=AC2:Zn+Binding+Site+For+Chain+A'>AC2</scene>, <scene name='pdbsite=AC3:Ca+Binding+Site+For+Chain+A'>AC3</scene>, <scene name='pdbsite=AC4:Cl+Binding+Site+For+Chain+A'>AC4</scene>, <scene name='pdbsite=AC5:Nag+Binding+Site+For+Chain+A'>AC5</scene>, <scene name='pdbsite=AC6:Nag+Binding+Site+For+Chain+A'>AC6</scene>, <scene name='pdbsite=AC7:Nag+Binding+Site+For+Chain+A'>AC7</scene>, <scene name='pdbsite=AC8:Nag+Binding+Site+For+Chain+A'>AC8</scene>, <scene name='pdbsite=BC1:Nag+Binding+Site+For+Chain+A'>BC1</scene>, <scene name='pdbsite=BC2:Nag+Binding+Site+For+Chain+A'>BC2</scene>, <scene name='pdbsite=BC3:Nag+Binding+Site+For+Chain+A'>BC3</scene>, <scene name='pdbsite=BC4:Nag+Binding+Site+For+Chain+A'>BC4</scene>, <scene name='pdbsite=BC5:Nag+Binding+Site+For+Chain+A'>BC5</scene>, <scene name='pdbsite=BC6:Nag+Binding+Site+For+Chain+A'>BC6</scene>, <scene name='pdbsite=BC7:Bma+Binding+Site+For+Chain+A'>BC7</scene>, <scene name='pdbsite=BC8:Man+Binding+Site+For+Chain+A'>BC8</scene> and <scene name='pdbsite=BC9:G88+Binding+Site+For+Chain+A'>BC9</scene>. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JBJ OCA]. | ||
==Reference== | ==Reference== | ||
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[[Category: zinc]] | [[Category: zinc]] | ||
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Feb 3 10:43:44 2008'' | ||
