Sandbox Reserved 164: Difference between revisions
From Proteopedia
Jump to navigationJump to search
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
<!-- PLEASE DO NOT DELETE THIS TEMPLATE --> | <!-- PLEASE DO NOT DELETE THIS TEMPLATE --> | ||
<!-- PLEASE ADD YOUR CONTENT BELOW HERE --> | <!-- PLEASE ADD YOUR CONTENT BELOW HERE --> | ||
<Structure load='3ECU' size='500' frame='true' align='right' caption='Crystal Structure of SOD 1 protein, PDB ID: 3ECU' scene='Insert optional scene name here' /> | <Structure load='3ECU' size='500' frame='true' align='right' caption='Crystal Structure of SOD 1 protein, PDB ID: 3ECU' scene='Insert optional scene name here' /> | ||
| Line 6: | Line 5: | ||
== Superoxide Dismutase 1 (SOD 1) == | == Superoxide Dismutase 1 (SOD 1) == | ||
SOD1 is one of three oxidoreductase enzymes that is responsible for binding copper and zinc ions to highly reactive oxygen free radicals and transforming them into oxygen and hydrogen peroxide <ref name="McCord">McCord JM, Fridovich I. Superoxide dismutase. An enzymic function for erythrocuprein (hemocuprein). J Biol Chem. 1969 Nov 25;244(22):6049-55. PMID:5389100</ref> | SOD1 is one of three oxidoreductase enzymes that is responsible for binding copper and zinc ions to highly reactive oxygen free radicals and transforming them into oxygen and hydrogen peroxide. <ref name="McCord">McCord JM, Fridovich I. Superoxide dismutase. An enzymic function for erythrocuprein (hemocuprein). J Biol Chem. 1969 Nov 25;244(22):6049-55. PMID:5389100</ref> This occurs in a quick two step mechanism: | ||
M(n+1)+-SOD + O2− → Mn+-SOD + O2 | M(n+1)+-SOD + O2− → Mn+-SOD + O2 | ||
| Line 12: | Line 11: | ||
Mn+-SOD + O2− + 2H+ → M(n+1)+-SOD + H2O2<ref name="Tainer">Tainer JA, Getzoff ED, Richardson JS, Richardson DC. Structure and mechanism of copper, zinc superoxide dismutase. Nature. 1983 Nov 17-23;306(5940):284-7. PMID:6316150</ref>. | Mn+-SOD + O2− + 2H+ → M(n+1)+-SOD + H2O2<ref name="Tainer">Tainer JA, Getzoff ED, Richardson JS, Richardson DC. Structure and mechanism of copper, zinc superoxide dismutase. Nature. 1983 Nov 17-23;306(5940):284-7. PMID:6316150</ref>. | ||
This protein is coded for by the SOD 1 gene located on chromosome 21 at position 21q22.1 from base pairs 33,031,934 to 33,041,243 <ref name="Sod1">SOD 1. Genetics Home Reference. U.S. National Library of Medicine; 2010</ref> | This protein is coded for by the SOD 1 gene located on chromosome 21 at position 21q22.1 from base pairs 33,031,934 to 33,041,243. <ref name="Sod1">SOD 1. Genetics Home Reference. U.S. National Library of Medicine; 2010</ref> | ||
== Structure == | == Structure == | ||
The SOD 1 protein is a homodimer with an amino acid sequence length of 154. SOD 1 has an 8-stranded "Greek key" beta-barrel shape with the active site located between the barrels. The copper and zinc ligands are made up of six histidine side-chains and one aspartate side-chain with the metal ions connected with by a single histidine chain.<ref name="Tainer">Tainer JA, Getzoff ED, Richardson JS, Richardson DC. Structure and mechanism of copper, zinc superoxide dismutase. Nature. 1983 Nov 17-23;306(5940):284-7. PMID:6316150</ref> | The SOD 1 protein is a homodimer with an amino acid sequence length of 154. SOD 1 has an 8-stranded "Greek key" beta-barrel shape with the active site located between the barrels. The copper and zinc ligands are made up of six histidine side-chains and one aspartate side-chain with the metal ions connected with by a single histidine chain.<ref name="Tainer">Tainer JA, Getzoff ED, Richardson JS, Richardson DC. Structure and mechanism of copper, zinc superoxide dismutase. Nature. 1983 Nov 17-23;306(5940):284-7. PMID:6316150</ref> This first SOD structure was determined by Irwin Fridovich and Joe McCord in 1973 <ref name="McCord">McCord JM, Fridovich I. Superoxide dismutase. An enzymic function for erythrocuprein (hemocuprein). J Biol Chem. 1969 Nov 25;244(22):6049-55. PMID:5389100</ref><ref name="McCord2">McCord JM, Fridovich I. Superoxide dismutase: the first twenty years (1968-1988). Free Radic Biol Med. 1988;5(5-6):363-9. PMID:2855736</ref> with the SOD 1 "Greek key" structure visualized by Dr. Jane Richardson (see below).<ref name="Tainer">Tainer JA, Getzoff ED, Richardson JS, Richardson DC. Structure and mechanism of copper, zinc superoxide dismutase. Nature. 1983 Nov 17-23;306(5940):284-7. PMID:6316150</ref> | ||
[[Image:601px-2SOD ribbon pastel.jpg|300px|left]] | [[Image:601px-2SOD ribbon pastel.jpg|300px|left]] | ||
== ALS == | == ALS == | ||
Mutations to the SOD 1 protein have been linked to the development of familial amyotrophic lateral sclerosis. <ref name="Al-Chalabi">Al-Chalabi A, Leigh PN (August 2000). "Recent advances in amyotrophic lateral sclerosis". Curr. Opin. Neurol. 13 (4): 397–405. PMID 10970056.</ref> | |||
== References == | == References == | ||
<references /> | <references /> | ||