2p4h: Difference between revisions

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New page: left|200px<br /><applet load="2p4h" size="350" color="white" frame="true" align="right" spinBox="true" caption="2p4h, resolution 1.40Å" /> '''Crystal Structure of...
 
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==Overview==
==Overview==
Isoflavonoids are commonly found in leguminous plants, where they play, important roles in plant defense and have significant health benefits for, animals and humans. Vestitone reductase catalyzes a stereospecific, NADPH-dependent reduction of (3R)-vestitone in the biosynthesis of the, antimicrobial isoflavonoid phytoalexin medicarpin. The crystal structure, of alfalfa (Medicago sativa L.) vestitone reductase has been determined at, 1.4 A resolution. The structure contains a classic Rossmann fold domain in, the N terminus and a small C-terminal domain. Sequence and structural, analysis showed that vestitone reductase is a member of the short-chain, dehydrogenase/reductase (SDR) superfamily despite the low levels of, sequence identity, and the prominent structural differences from other SDR, enzymes with known structures. The putative binding sites for the, co-factor NADPH and the substrate (3R)-vestitone were defined and located, in a large cleft formed between the N and C-terminal domains of enzyme., Potential key residues for enzyme activity were also identified, including, the catalytic triad Ser129-Tyr164-Lys168. A molecular docking study showed, that (3R)-vestitone, but not the (3S) isomer, forms favored interactions, with the co-factor and catalytic triad, thus providing an explanation for, the enzyme's strict substrate stereo-specificity.
Isoflavonoids are commonly found in leguminous plants, where they play important roles in plant defense and have significant health benefits for animals and humans. Vestitone reductase catalyzes a stereospecific NADPH-dependent reduction of (3R)-vestitone in the biosynthesis of the antimicrobial isoflavonoid phytoalexin medicarpin. The crystal structure of alfalfa (Medicago sativa L.) vestitone reductase has been determined at 1.4 A resolution. The structure contains a classic Rossmann fold domain in the N terminus and a small C-terminal domain. Sequence and structural analysis showed that vestitone reductase is a member of the short-chain dehydrogenase/reductase (SDR) superfamily despite the low levels of sequence identity, and the prominent structural differences from other SDR enzymes with known structures. The putative binding sites for the co-factor NADPH and the substrate (3R)-vestitone were defined and located in a large cleft formed between the N and C-terminal domains of enzyme. Potential key residues for enzyme activity were also identified, including the catalytic triad Ser129-Tyr164-Lys168. A molecular docking study showed that (3R)-vestitone, but not the (3S) isomer, forms favored interactions with the co-factor and catalytic triad, thus providing an explanation for the enzyme's strict substrate stereo-specificity.


==About this Structure==
==About this Structure==
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==Reference==
==Reference==
Crystal Structure of Vestitone Reductase from Alfalfa (Medicago sativa L.)., Shao H, Dixon RA, Wang X, J Mol Biol. 2007 May 25;369(1):265-76. Epub 2007 Mar 21. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=17433362 17433362]
Crystal structure of vestitone reductase from alfalfa (Medicago sativa L.)., Shao H, Dixon RA, Wang X, J Mol Biol. 2007 May 25;369(1):265-76. Epub 2007 Mar 21. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=17433362 17433362]
[[Category: Medicago sativa]]
[[Category: Medicago sativa]]
[[Category: Single protein]]
[[Category: Single protein]]
[[Category: Dixon, R.A.]]
[[Category: Dixon, R A.]]
[[Category: Shao, H.]]
[[Category: Shao, H.]]
[[Category: Wang, X.]]
[[Category: Wang, X.]]
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[[Category: nadph-dependent reductase]]
[[Category: nadph-dependent reductase]]


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