Homology modeling servers: Difference between revisions
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''The list below is incomplete, and may not include some of the best servers, nor does it include assessments of server performance. Please help by adding additional servers.'' | ''The list below is incomplete, and may not include some of the best servers, nor does it include assessments of server performance. Please help by adding additional servers.'' | ||
* [http://swissmodel.expasy.org/ SWISS-MODEL] provides a free, fully-automated homology modeling service. Using the ''Automated Mode'', you submit a protein sequence. When the [[PDB]] contains an empirically-determined structure with sufficient sequence identity with your | * [http://swissmodel.expasy.org/ SWISS-MODEL] provides a free, fully-automated homology modeling service. Using the ''Automated Mode'', you submit a protein sequence. When the [[PDB]] contains an empirically-determined structure with sufficient sequence identity with your query sequence, it will be used as a template. The resulting homology model will be constructed automatically. | ||
* [http://modbase.compbio.ucsf.edu/modbase-cgi/index.cgi ModBase: Database of Comparative Protein Structure Models] allows users to calculate comparative models on demand. | * [http://modbase.compbio.ucsf.edu/modbase-cgi/index.cgi ModBase: Database of Comparative Protein Structure Models] allows users to calculate comparative models on demand. | ||