User:Stephen Mills/Peptide tutorial 1: Difference between revisions

From Proteopedia
Jump to navigationJump to search
Line 236: Line 236:


<Structure load='ArgTyr.pdb' size='500' frame='true' align='left' caption='' scene='User:Stephen_Mills/Sandbox_2_Peptide_tutorial/Argtyr/1' />
<Structure load='ArgTyr.pdb' size='500' frame='true' align='left' caption='' scene='User:Stephen_Mills/Sandbox_2_Peptide_tutorial/Argtyr/1' />
Scroll down for the answer.
<Structure load='ArgTyr.pdb' size='500' frame='true' align='left' caption='' scene='User:Stephen_Mills/Sandbox_2_Peptide_tutorial/Argtyr/1' />
Click here to label the N and C termini.
Click here to label the two amino acids.
Notice that the Arginine is on the amino terminal end and the Tyrosine is on the carboxy terminal end.
The short way to name this dipeptide is: <big>'''Arg-Tyr'''</big> or <big>'''RY'''</big>
Identify the atoms involved in the peptide bond between Tyrosine and Arginine
Click here to change the color of those atoms to white.