Calculate structure: Difference between revisions
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'''Detection of Known γ-turns''' | '''Detection of Known γ-turns''' | ||
''Calculate structure'' only identifies one out of the eleven classic turns identified by Miner-White et. al.<ref name="Miner" /> | ''Calculate structure'' only identifies one out of the eleven classic γ-turns identified by Miner-White et. al.<ref name="Miner" />. The hbond of the classic γ-turn in thermolysin is displayed and | ||
* <scene name='Calculate_structure/Alpha_lytic/2'>α-lytic protease</scene> - <scene name='Calculate_structure/Alpha_lytic2/1'> | * <scene name='Calculate_structure/Thermolysin2/1'>Thermolysin</scene> (8TLN, which now supersedes 3TLN which was actually used by Miner-White et. al.); <scene name='Calculate_structure/Thermolysin/2'>Isolated view</scene>. | ||
The hbonds were not identified by ''Calculate structure'' in the other ten classic turns and the turn segments were not included in the summary displayed in the console. Several illustrations are given. | |||
* <scene name='Calculate_structure/Alpha_lytic/2'>α-lytic protease</scene> - <scene name='Calculate_structure/Alpha_lytic2/1'>Isolated turn</scene> | |||
* Proteinase A (2SGA); Isolated turn | |||
However, with some of these turns a residue making up the turn is included along with contiguous residues in a T segment of the summary. | However, with some of these turns a residue making up the turn is included along with contiguous residues in a T segment of the summary. | ||
