Histone: Difference between revisions
From Proteopedia
Jump to navigationJump to search
No edit summary |
Michal Harel (talk | contribs) No edit summary |
||
| Line 5: | Line 5: | ||
{{TOC limit|limit=2}} | {{TOC limit|limit=2}} | ||
== 3D Structures of histone == | == 3D Structures of histone == | ||
''Updated December 2011'' | |||
===Histone=== | ===Histone=== | ||
[[1yqa]] – yH1 (mutant) – yeast – NMR<BR /> | [[1yqa]] – yH1 (mutant) – yeast – NMR<BR /> | ||
[[1uss]], [[1ust]] – yH1 globular domain - NMR<BR /> | [[1uss]], [[1ust]], [[1uhm]] – yH1 globular domain - NMR<BR /> | ||
[[2xd7]], [[1zr3]], [[2fxk]] – H2A macro domain – human<BR /> | [[1ghc]] – cH1 – chicken - NMR<br /> | ||
[[2xd7]], [[1zr3]], [[1zr5]], [[2fxk]] – H2A macro domain – human<BR /> | |||
[[1yd9]] – H2A macro domain – rat<BR /> | [[1yd9]] – H2A macro domain – rat<BR /> | ||
[[1ku5]] – HPHA – ''Pyrococcus horikoshii''<BR /> | [[1ku5]] – HPHA – ''Pyrococcus horikoshii''<BR /> | ||
| Line 17: | Line 20: | ||
[[1bfm]] – MfHB - NMR<BR /> | [[1bfm]] – MfHB - NMR<BR /> | ||
[[1f1e]] – H – ''Methanopyrus kandleri''<BR /> | [[1f1e]] – H – ''Methanopyrus kandleri''<BR /> | ||
[[1hst]] – cH5 | [[1hst]] – cH5 <BR /> | ||
[[3iid]], [[3iif]] – H2A macro domain + ADP-ribose<BR /> | [[3iid]], [[3iif]] – H2A macro domain + ADP-ribose<BR /> | ||
[[2g9a]], [[2g99]], [[2h13]] – H3 + WD-repeat protein | [[2g9a]], [[2g99]], [[2h13]] – H3 + WD-repeat protein<br /> | ||
[[1pfb]] – H3 + polycomb protein – ''Strongylocentrus purpuratus'' | |||
===Nucleosome core=== | ===Nucleosome core=== | ||
| Line 27: | Line 31: | ||
[[3qzs]], [[3qzt]] – XlH4 + nucleosome-remodeling factor subunit BPTF – ''Xenopus laevis''<BR /> | [[3qzs]], [[3qzt]] – XlH4 + nucleosome-remodeling factor subunit BPTF – ''Xenopus laevis''<BR /> | ||
[[2io5]] - XlH3.1 + H4 + anti-silencing protein<BR /> | [[2io5]] - XlH3.1 + H4 + anti-silencing protein<BR /> | ||
[[ | [[2yfv]], [[2yfw]] - H4 + H3-like centromeric protein + SCM3 – ''Kluyveromyces lactis''<BR /> | ||
[[2l5a]] - yH4/H3-like centromeric protein/SCM3<BR /> | [[2l5a]] - yH4/H3-like centromeric protein/SCM3<BR /> | ||
[[2jss]] - yH2A/H2B + CHZ1 – NMR<BR /> | [[2jss]] - yH2A/H2B + CHZ1 – NMR<BR /> | ||
[[2hue]] - yH3 + H4 + anti-silencing protein<BR /> | [[2hue]] - yH3 + H4 + anti-silencing protein<BR /> | ||
[[2xql]] - cH3.2 + H4 + H2A + H2B – EM | [[2xql]], [[3c9k]] - cH3.2 + H4 + H2A + H2B – EM | ||
===Nucleosome core + DNA=== | ===Nucleosome core + DNA=== | ||
[[3an2]] – hH4 + H2A + H2B + H3-like centromeric protein + DNA<BR /> | [[3an2]] – hH4 + H2A + H2B + H3-like centromeric protein + DNA<BR /> | ||
[[3av1]], [[2av2]] – hH3.2 + H4 + H2A + H2B + DNA<BR /> | [[3av1]], [[2av2]], [[3av2]] – hH3.2 + H4 + H2A + H2B + DNA<BR /> | ||
[[3a6n]], [[3afa]], [[2cv5]] - hH3.1 + H4 + H2A + H2B + DNA<BR /> | [[3a6n]], [[3afa]], [[2cv5]] - hH3.1 + H4 + H2A + H2B + DNA<BR /> | ||
[[3ayw]], [[3aze]], [[3azf]], [[3azg]], [[3azh]] - hH3.1 (mutant) + H4 + H2A + H2B + DNA<br /> | |||
[[3azi]], [[3azj]], [[3azk]], [[3azl]], [[3azm]], [[3azn]] - hH3.1 + H4 (mutant) + H2A + H2B + DNA<br /> | |||
[[3mnn]], [[3o62]], [[3lz0]], [[3lz1]], [[3lel]], [[3kuy]], [[3c1b]], [[3c1c]], [[2nzd]], [[2fj7]], [[1zbb]], [[1s32]], [[1p34]], [[1p3a]], [[1p3b]], [[1p3f]], [[1p3g]], [[1p3i]], [[1p3k]], [[1p3l]], [[1p3m]], [[1p3o]], [[1p3p]], [[1m18]], [[1m19]], [[1m1a]], [[1kx3]], [[1kx4]], [[1kx5]], [[1aoi]] - XlH3.2 + H4 + H2A + H2B + DNA<BR /> | [[3mnn]], [[3o62]], [[3lz0]], [[3lz1]], [[3lel]], [[3kuy]], [[3c1b]], [[3c1c]], [[2nzd]], [[2fj7]], [[1zbb]], [[1s32]], [[1p34]], [[1p3a]], [[1p3b]], [[1p3f]], [[1p3g]], [[1p3i]], [[1p3k]], [[1p3l]], [[1p3m]], [[1p3o]], [[1p3p]], [[1m18]], [[1m19]], [[1m1a]], [[1kx3]], [[1kx4]], [[1kx5]], [[1aoi]] - XlH3.2 + H4 + H2A + H2B + DNA<BR /> | ||
[[2f8n]] - XlH3.1 + H4 + H2A + H2B + H3 + H2A macro domain + DNA<BR /> | [[2f8n]] - XlH3.1 + H4 + H2A + H2B + H3 + H2A macro domain + DNA<BR /> | ||
| Line 48: | Line 54: | ||
[[2aro]], [[1tzy]], [[1hq3]], [[2hio]], [[1hio]] - cH3 + H4 + H2A + H2B | [[2aro]], [[1tzy]], [[1hq3]], [[2hio]], [[1hio]] - cH3 + H4 + H2A + H2B | ||
[[1eqz]] - cH3 + H4 + H2A + H2B + DNA<BR /> | [[1eqz]] - cH3 + H4 + H2A + H2B + DNA<BR /> | ||
[[2pyo]], [[3nqb]] - H3 + H4 + H2A + H2B + DNA – ''Drosophila melanogaster''<BR /> | [[2pyo]], [[2nqb]], [[3nqb]] - H3 + H4 + H2A + H2B + DNA – ''Drosophila melanogaster''<BR /> | ||
[[1u35]] - mH3.1 + H2A + H2B + His2A macro domain + DNA – mouse<BR /> | [[1u35]] - mH3.1 + H2A + H2B + His2A macro domain + DNA – mouse<BR /> | ||
[[1f66]] - XlH3 + mH4 + hH2A + XlH2B + DNA<BR /> | [[1f66]] - XlH3 + mH4 + hH2A + XlH2B + DNA<BR /> | ||
