Tom Sandbox: Difference between revisions

From Proteopedia
Jump to navigationJump to search
Alan Tom (talk | contribs)
No edit summary
Alan Tom (talk | contribs)
No edit summary
Line 29: Line 29:
At every d and d' we have a Leucine, while at the a and a' locations we typically see valine. <ref name="Voet" /> In the opposite positions one tends to see more charged and polar residues. The Leucine and Valine repeats create a strongly hydrophobic region between the two alpha helices. This clearly shows the relationship between coils and shown below, we can see that for the two helices to be symmetrical, the Leucines must not in fact be oriented as a zipper, but on the same levels.
At every d and d' we have a Leucine, while at the a and a' locations we typically see valine. <ref name="Voet" /> In the opposite positions one tends to see more charged and polar residues. The Leucine and Valine repeats create a strongly hydrophobic region between the two alpha helices. This clearly shows the relationship between coils and shown below, we can see that for the two helices to be symmetrical, the Leucines must not in fact be oriented as a zipper, but on the same levels.


[[Image:Symmetric/Asymmetric_helices.jpg|center|300px]]
[[Image:Asymmetric_helices.jpg|center|300px]]
 
'''Image 2: The figure above comes from the paper - Secondary Structure of a Leucine Zipper Determined by NMR.<ref name="abc"/>'''
 




Line 40: Line 43:
[[Image:ph effects.jpg|center|500px]]
[[Image:ph effects.jpg|center|500px]]


'''Image 2: A schematic representation of the Leucine Zipper acting as nano-tweezers under different pH conditions<ref name="ph"/>.
'''Image 3: A schematic representation of the Leucine Zipper acting as nano-tweezers under different pH conditions<ref name="ph"/>.