Morphs: Difference between revisions
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* Database of Macromolecular Movements with Associated Tools for Flexibility and Geometric Analysis, [http://molmovdb.org molmovdb.org], developed by Mark Gerstein and coworkers at Yale University, USA.<ref name='flores'>The Database of Macromolecular Motions: | * Database of Macromolecular Movements with Associated Tools for Flexibility and Geometric Analysis, [http://molmovdb.org molmovdb.org], developed by Mark Gerstein and coworkers at Yale University, USA.<ref name='flores'>The Database of Macromolecular Motions: | ||
new features added at the decade mark. Flores, S. ''et al.'', Nucleic Acids Res., .34 (Database issue) D1–D6. 2006. [http://www.ncbi.nlm.nih.gov/pubmed/16381870 PubMed 16381870], [http://papers.gersteinlab.org/e-print/molmovdb-update-nar/preprint.pdf PDF].</ref><ref>Database of Macromolecular Movements with Associated Tools for Flexibility and Geometric Analysis, [http://molmovdb.org molmovdb.org], developed by Mark Gerstein and coworkers at Yale University, USA.</ref> | new features added at the decade mark. Flores, S. ''et al.'', Nucleic Acids Res., .34 (Database issue) D1–D6. 2006. [http://www.ncbi.nlm.nih.gov/pubmed/16381870 PubMed 16381870], [http://papers.gersteinlab.org/e-print/molmovdb-update-nar/preprint.pdf PDF].</ref><ref>Database of Macromolecular Movements with Associated Tools for Flexibility and Geometric Analysis, [http://molmovdb.org molmovdb.org], developed by Mark Gerstein and coworkers at Yale University, USA.</ref> | ||
* [http://morphs.proteinexplorer.org Animations in Protein Explorer] developed by [[User:Eric Martz|Eric Martz]] at the University of Massachusetts, Amherst, USA.<ref name='pe'>Protein Explorer: easy yet powerful macromolecular visualization. Martz, E., Trends Biochem Sci. 27:107-9. 2002. [http://www.ncbi.nlm.nih.gov/pubmed/11852249 PubMed 11852249 | * [http://morphs.proteinexplorer.org Animations in Protein Explorer] developed by [[User:Eric Martz|Eric Martz]] at the University of Massachusetts, Amherst, USA.<ref name='pe'>Protein Explorer: easy yet powerful macromolecular visualization. Martz, E., Trends Biochem Sci. 27:107-9. 2002. [http://www.ncbi.nlm.nih.gov/pubmed/11852249 PubMed 11852249] developed by [[User:Eric Martz|Eric Martz]] at the University of Massachusetts, Amherst, USA.</ref> | ||
* [http://www.people.umass.edu/ktheis/ Morphs of T7 RNA polymerase and inhibition of trypsin by serpin] by [[User:Karsten Theis|Karsten Theis]], [[User:Craig T Martin|Craig Martin]], and coworkers, University of Massachusetts, Amherst, USA.<ref name='theisT7'>Topological and conformational analysis of the initiation and elongation complex of t7 RNA polymerase suggests a new twist. K. Theis, P. Gong, and C. T. Martin, Biochemistry 43:12709-15, 2004. [[http://www.ncbi.nlm.nih.gov/pubmed/15461442 PubMed 15461442]].</ref><ref name='theis'>[http://www.people.umass.edu/ktheis/ Morphs of T7 RNA polymerase and inhibition of trypsin by serpin] by [[User:Karsten Theis|Karsten Theis]], [[User:Craig T Martin|Craig Martin]], and coworkers, University of Massachusetts, Amherst, USA. These are unusual in utilizing [[#Modeling Intermediate Key Frames|hand-modeled intermediate key frames]].</ref> These are unusual in utilizing [[#Modeling Intermediate Key Frames|hand-modeled intermediate key frames]]. | * [http://www.people.umass.edu/ktheis/ Morphs of T7 RNA polymerase and inhibition of trypsin by serpin] by [[User:Karsten Theis|Karsten Theis]], [[User:Craig T Martin|Craig Martin]], and coworkers, University of Massachusetts, Amherst, USA.<ref name='theisT7'>Topological and conformational analysis of the initiation and elongation complex of t7 RNA polymerase suggests a new twist. K. Theis, P. Gong, and C. T. Martin, Biochemistry 43:12709-15, 2004. [[http://www.ncbi.nlm.nih.gov/pubmed/15461442 PubMed 15461442]].</ref><ref name='theis'>[http://www.people.umass.edu/ktheis/ Morphs of T7 RNA polymerase and inhibition of trypsin by serpin] by [[User:Karsten Theis|Karsten Theis]], [[User:Craig T Martin|Craig Martin]], and coworkers, University of Massachusetts, Amherst, USA. These are unusual in utilizing [[#Modeling Intermediate Key Frames|hand-modeled intermediate key frames]].</ref> These are unusual in utilizing [[#Modeling Intermediate Key Frames|hand-modeled intermediate key frames]]. | ||
