Calculate structure: Difference between revisions

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===Summary of observations obtained from using ''Calculate structure''===
===Summary of observations obtained from using ''Calculate structure''===
''Calculate structure'' was used to identify the turns in myohemerthyrin and Domain 2 of chain A Glycogen Phosphorylase. Two proteins is a small sample, but it does give some indication of the nature of the T: segments (turns) reported in the summary and of the pattern of blue colored trace segments in the displayed structure. There are additional samples, which you can analyze, following these two proteins.
The following bullet points summarize the results given in the upper console box and the applet display after ''Calculate structure'' and "calculate hbonds structure" were used to identify the turns in myohemerthyrin and Domain 2 of chain A Glycogen Phosphorylase. The nature of the T: segments (turns) reported in the console summary and the pattern of blue colored trace segments in the displayed structure are the focus of the summary.  
   
   
* Most T segments in the summary contain one or two residues but a few contain three or four residues. With isolated turns DSSP reports two, three and four residues for 3-, 4-, and 5-turns, respectively. If the turn is overlapping with a structure of higher priority fewer residues will be included in the segment.  
* Most T segments in the summary contain one or two residues but a few contain three or four residues. With isolated turns DSSP reports two, three and four residues for 3-, 4-, and 5-turns, respectively. If the turn is overlapping with a structure of higher priority fewer residues will be included in the segment.