1diz: Difference between revisions

Revision as of 15:44, 25 July 2012

Ligands:

NA

Non-Standard Residues:

NRI

Activity:

DNA-3-methyladenine glycosylase II, with EC number 3.2.2.21

Structural annotation:
Resources:	CATH : 1Diza02, 1Diza03, 1Diza01, 1Dizb01, 1Dizb02, 1Dizb03 InterPro : Ipr000035, Ipr003265, Ipr011257, Ipr010316, Ipr012294 Pfam : PF00730, PF06029 SCOP : d1diza1, d1diza2, d1dizb1, d1dizb2 UniProt : P04395

Functional annotation:
Biological process:	response to DNA damage stimulus base-excision repair DNA repair
Molecular function:	hydrolase activity DNA binding protein binding alkylbase DNA N-glycosylase activity

Evolutionary conservation:

Toggle Conservation Colors:

Rows = identical sequences:

Further Information:

Caveats,

Resources:

FirstGlance, OCA, PDBsum, RCSB

Coordinates:

save as pdb, mmCIF, xml

1diz is a 6 chain structure of DNA glycosylate with sequence from Escherichia coli. Full crystallographic information is available from OCA.

Hollis T, Ichikawa Y, Ellenberger T. DNA bending and a flip-out mechanism for base excision by the helix-hairpin-helix DNA glycosylase, Escherichia coli AlkA. EMBO J. 2000 Feb 15;19(4):758-66. PMID:10675345 doi:https://dx.doi.org/10.1093/emboj/19.4.758

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