1bfd: Difference between revisions

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[[Image:1bfd.gif|left|200px]]<br /><applet load="1bfd" size="350" color="white" frame="true" align="right" spinBox="true"
[[Image:1bfd.gif|left|200px]]
caption="1bfd, resolution 1.60&Aring;" />
 
'''BENZOYLFORMATE DECARBOXYLASE FROM PSEUDOMONAS PUTIDA'''<br />
{{Structure
|PDB= 1bfd |SIZE=350|CAPTION= <scene name='initialview01'>1bfd</scene>, resolution 1.60&Aring;
|SITE= <scene name='pdbsite=CA1:Divalent+Cation+Bound+To+Pyrophosphate+Of+Tpp+(Ca+529)'>CA1</scene>, <scene name='pdbsite=CA2:Ca+Ion+At+Crystal+Contact+(Ca+532)'>CA2</scene>, <scene name='pdbsite=MG1:Mg+Ion+On+Crystallographic+Two-Fold+At+Dimer+Interface+(+...'>MG1</scene> and <scene name='pdbsite=PP2:Polyproline+Type+II+Helix+From+ARG+334+Through+VAL+346'>PP2</scene>
|LIGAND= <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene> and <scene name='pdbligand=TPP:THIAMINE DIPHOSPHATE'>TPP</scene>
|ACTIVITY= [http://en.wikipedia.org/wiki/Benzoylformate_decarboxylase Benzoylformate decarboxylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.1.7 4.1.1.7]
|GENE= MDLC ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=303 Pseudomonas putida])
}}
 
'''BENZOYLFORMATE DECARBOXYLASE FROM PSEUDOMONAS PUTIDA'''
 


==Overview==
==Overview==
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==About this Structure==
==About this Structure==
1BFD is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Pseudomonas_putida Pseudomonas putida] with <scene name='pdbligand=CA:'>CA</scene>, <scene name='pdbligand=MG:'>MG</scene> and <scene name='pdbligand=TPP:'>TPP</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Active as [http://en.wikipedia.org/wiki/Benzoylformate_decarboxylase Benzoylformate decarboxylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.1.7 4.1.1.7] Known structural/functional Sites: <scene name='pdbsite=CA1:Divalent+Cation+Bound+To+Pyrophosphate+Of+Tpp+(Ca+529)'>CA1</scene>, <scene name='pdbsite=CA2:Ca+Ion+At+Crystal+Contact+(Ca+532)'>CA2</scene>, <scene name='pdbsite=MG1:Mg+Ion+On+Crystallographic+Two-Fold+At+Dimer+Interface+(+...'>MG1</scene> and <scene name='pdbsite=PP2:Polyproline+Type+II+Helix+From+ARG+334+Through+VAL+346'>PP2</scene>. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BFD OCA].  
1BFD is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pseudomonas_putida Pseudomonas putida]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BFD OCA].  


==Reference==
==Reference==
The crystal structure of benzoylformate decarboxylase at 1.6 A resolution: diversity of catalytic residues in thiamin diphosphate-dependent enzymes., Hasson MS, Muscate A, McLeish MJ, Polovnikova LS, Gerlt JA, Kenyon GL, Petsko GA, Ringe D, Biochemistry. 1998 Jul 14;37(28):9918-30. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=9665697 9665697]
The crystal structure of benzoylformate decarboxylase at 1.6 A resolution: diversity of catalytic residues in thiamin diphosphate-dependent enzymes., Hasson MS, Muscate A, McLeish MJ, Polovnikova LS, Gerlt JA, Kenyon GL, Petsko GA, Ringe D, Biochemistry. 1998 Jul 14;37(28):9918-30. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/9665697 9665697]
[[Category: Benzoylformate decarboxylase]]
[[Category: Benzoylformate decarboxylase]]
[[Category: Pseudomonas putida]]
[[Category: Pseudomonas putida]]
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[[Category: thiamin diphosphate]]
[[Category: thiamin diphosphate]]


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