1zpd: Difference between revisions

Revision as of 15:35, 27 July 2012

Ligands:

CIT, DPX, MG

Activity:

Pyruvate decarboxylase, with EC number 4.1.1.1

Structural annotation:
Resources:	CATH : 1Zpda01, 1Zpda03, 1Zpda02, 1Zpdb01, 1Zpdb02, 1Zpdb03, 1Zpde02, 1Zpde03, 1Zpde01, 1Zpdf03, 1Zpdf01, 1Zpdf02 InterPro : Ipr012000, Ipr000399, Ipr012001, Ipr011766, Ipr012110 Pfam : PF02775, PF02776, PF00205 SCOP : d1zpda1, d1zpda3, d1zpda2, d1zpdb1, d1zpdb3, d1zpdb2, d1zpde3, d1zpde2, d1zpde1, d1zpdf1, d1zpdf2, d1zpdf3 UniProt : P06672

Functional annotation:
Molecular function:	magnesium ion binding carboxy-lyase activity thiamin pyrophosphate binding lyase activity pyruvate decarboxylase activity metal ion binding transferase activity catalytic activity

Evolutionary conservation:

Toggle Conservation Colors:	Rows = identical sequences:
Further Information:	Caveats, Explanation, Complete Results at ConSurfDB

Resources:

FirstGlance, OCA, PDBsum, RCSB

Coordinates:

save as pdb, mmCIF, xml

1zpd is a 4 chain structure of Pyruvate decarboxylase with sequence from Zymomonas mobilis. Full crystallographic information is available from OCA.

Dobritzsch D, Konig S, Schneider G, Lu G. High resolution crystal structure of pyruvate decarboxylase from Zymomonas mobilis. Implications for substrate activation in pyruvate decarboxylases. J Biol Chem. 1998 Aug 7;273(32):20196-204. PMID:9685367
Ciszak EM, Korotchkina LG, Dominiak PM, Sidhu S, Patel MS. Structural basis for flip-flop action of thiamin pyrophosphate-dependent enzymes revealed by human pyruvate dehydrogenase. J Biol Chem. 2003 Jun 6;278(23):21240-6. Epub 2003 Mar 21. PMID:12651851 doi:https://dx.doi.org/10.1074/jbc.M300339200

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