2rdm: Difference between revisions

Line 1:

~~[[Image:2rdm.png|left|200px]]~~

==Crystal structure of response regulator receiver protein from Sinorhizobium medicae WSM419==

~~{{STRUCTURE_2rdm| PDB=2rdm | SCENE= }}~~

== Structural highlights ==

<table><tr><td colspan='2'>[[2rdm]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Sinorhizobium_medicae_wsm419 Sinorhizobium medicae wsm419]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RDM OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2RDM FirstGlance]. <br>

===Crystal structure of response regulator receiver protein from Sinorhizobium medicae WSM419===

</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene><br>

<tr><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>

<tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Smed_4830 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=366394 Sinorhizobium medicae WSM419])</td></tr>

==~~About this Structure~~==

<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2rdm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2rdm OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2rdm RCSB], [http://www.ebi.ac.uk/pdbsum/2rdm PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/2rdm TOPSAN]</span></td></tr>

[[2rdm]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Sinorhizobium_medicae_wsm419 Sinorhizobium medicae wsm419]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RDM OCA].

<table>

== Evolutionary Conservation ==

[[Image:Consurf_key_small.gif|200px|right]]

Check<jmol>

<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/rd/2rdm_consurf.spt"</scriptWhenChecked>

<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>

<text>to colour the structure by Evolutionary Conservation</text>

</jmolCheckbox>

</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].

==See Also==

*[[Response regulator|Response regulator]]

__TOC__

</StructureSection>

[[Category: Sinorhizobium medicae wsm419]]

[[Category: Almo, S C.]]

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@@ Line 1: / Line 1: @@
-[[Image:2rdm.png|left|200px]]
+==Crystal structure of response regulator receiver protein from Sinorhizobium medicae WSM419==
+<StructureSection load='2rdm' size='340' side='right' caption='[[2rdm]], [[Resolution|resolution]] 1.76&Aring;' scene=''>
-{{STRUCTURE_2rdm|  PDB=2rdm  |  SCENE=  }}
+== Structural highlights ==
+<table><tr><td colspan='2'>[[2rdm]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Sinorhizobium_medicae_wsm419 Sinorhizobium medicae wsm419]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RDM OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2RDM FirstGlance]. <br>
-===Crystal structure of response regulator receiver protein from Sinorhizobium medicae WSM419===
+</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene><br>
+<tr><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+<tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Smed_4830 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=366394 Sinorhizobium medicae WSM419])</td></tr>
-==About this Structure==
+<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2rdm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2rdm OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2rdm RCSB], [http://www.ebi.ac.uk/pdbsum/2rdm PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/2rdm TOPSAN]</span></td></tr>
-[[2rdm]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Sinorhizobium_medicae_wsm419 Sinorhizobium medicae wsm419]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RDM OCA].
+<table>
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/rd/2rdm_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+<div style="clear:both"></div>
 ==See Also==
 *[[Response regulator|Response regulator]]
+__TOC__
+</StructureSection>
 [[Category: Sinorhizobium medicae wsm419]]
 [[Category: Almo, S C.]]