2ywf: Difference between revisions

Line 1:

~~[[Image:2ywf.png|left|200px]]~~

==Crystal structure of GMPPNP-bound LepA from Aquifex aeolicus==

~~{{STRUCTURE_2ywf| PDB=2ywf | SCENE= }}~~

== Structural highlights ==

<table><tr><td colspan='2'>[[2ywf]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Aquifex_aeolicus_vf5 Aquifex aeolicus vf5]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YWF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2YWF FirstGlance]. <br>

===Crystal structure of GMPPNP-bound LepA from Aquifex aeolicus===

</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GNP:PHOSPHOAMINOPHOSPHONIC+ACID-GUANYLATE+ESTER'>GNP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene><br>

<tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2ywe|2ywe]], [[2ywg|2ywg]], [[2ywh|2ywh]]</td></tr>

<tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">lepA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=224324 Aquifex aeolicus VF5])</td></tr>

==~~About this Structure~~==

<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ywf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ywf OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2ywf RCSB], [http://www.ebi.ac.uk/pdbsum/2ywf PDBsum], [http://www.topsan.org/Proteins/RSGI/2ywf TOPSAN]</span></td></tr>

[[2ywf]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Aquifex_aeolicus_vf5 Aquifex aeolicus vf5]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YWF OCA].

<table>

== Evolutionary Conservation ==

[[Image:Consurf_key_small.gif|200px|right]]

Check<jmol>

<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yw/2ywf_consurf.spt"</scriptWhenChecked>

<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>

<text>to colour the structure by Evolutionary Conservation</text>

</jmolCheckbox>

</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].

==See Also==

*[[Escherichia coli LepA%2C the ribosomal back translocase|Escherichia coli LepA%2C the ribosomal back translocase]]

*[[GTP-binding protein|GTP-binding protein]]

__TOC__

</StructureSection>

[[Category: Aquifex aeolicus vf5]]

[[Category: Hanawa-Suetsugu, K.]]

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@@ Line 1: / Line 1: @@
-[[Image:2ywf.png|left|200px]]
+==Crystal structure of GMPPNP-bound LepA from Aquifex aeolicus==
+<StructureSection load='2ywf' size='340' side='right' caption='[[2ywf]], [[Resolution|resolution]] 2.24&Aring;' scene=''>
-{{STRUCTURE_2ywf|  PDB=2ywf  |  SCENE=  }}
+== Structural highlights ==
+<table><tr><td colspan='2'>[[2ywf]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Aquifex_aeolicus_vf5 Aquifex aeolicus vf5]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YWF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2YWF FirstGlance]. <br>
-===Crystal structure of GMPPNP-bound LepA from Aquifex aeolicus===
+</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GNP:PHOSPHOAMINOPHOSPHONIC+ACID-GUANYLATE+ESTER'>GNP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene><br>
+<tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2ywe|2ywe]], [[2ywg|2ywg]], [[2ywh|2ywh]]</td></tr>
+<tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">lepA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=224324 Aquifex aeolicus VF5])</td></tr>
-==About this Structure==
+<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ywf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ywf OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2ywf RCSB], [http://www.ebi.ac.uk/pdbsum/2ywf PDBsum], [http://www.topsan.org/Proteins/RSGI/2ywf TOPSAN]</span></td></tr>
-[[2ywf]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Aquifex_aeolicus_vf5 Aquifex aeolicus vf5]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YWF OCA].
+<table>
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yw/2ywf_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+<div style="clear:both"></div>
 ==See Also==
+*[[Escherichia coli LepA%2C the ribosomal back translocase|Escherichia coli LepA%2C the ribosomal back translocase]]
 *[[GTP-binding protein|GTP-binding protein]]
+__TOC__
+</StructureSection>
 [[Category: Aquifex aeolicus vf5]]
 [[Category: Hanawa-Suetsugu, K.]]