Sandbox Reserved 712: Difference between revisions

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=== General structure of HIV-1 proteases ===
=== General structure of HIV-1 proteases ===


HIV-1 proteases are essential for HIV to survive. They are small enzymes, which are made out of two identical, 99 amino acids long, protein chains.
[[HIV-1 protease]]s are essential for HIV to survive. They are small enzymes, which are made out of two identical, 99 amino acids long, protein chains.
These chains form a tunnel, which is covered by so called (flexible) "flaps". The flaps's function is to "wrap around" the substrate-protein and holding it close to the tunnel and therefore to the active site.
These chains form a tunnel, which is covered by so called (flexible) "flaps". The flaps's function is to "wrap around" the substrate-protein and holding it close to the tunnel and therefore to the active site.
In the tunnel the acitve site is located. The acitve site uses water molecules to break the subrate-protein chain. It's most important residues are two aspartate amino acids.
In the tunnel the acitve site is located. The acitve site uses water molecules to break the subrate-protein chain. It's most important residues are two aspartate amino acids.


(Inhibitors occupie similar positions like the natural substrate-protein chain.)
(Inhibitors occupie similar positions like the natural substrate-protein chain.)
<ref>HIV-1 Protease, June 2000 Molecule of the Month by David Goodsell  [http://dx.doi.org/10.2210/rcsb_pdb/mom_2000_6 DOI: 10.2210/rcsb_pdb/mom_2000_6]</ref>  
<ref>HIV-1 Protease, June 2000 Molecule of the Month by David Goodsell  [http://dx.doi.org/10.2210/rcsb_pdb/mom_2000_6 DOI: 10.2210/rcsb_pdb/mom_2000_6]</ref>


=== X-ray structure analysis of 3ggu ===
=== X-ray structure analysis of 3ggu ===