2fb9: Difference between revisions

Line 1:

[[Image:~~2fb9~~.~~png~~|~~left~~|~~200px~~]]

==Crystal structure of the Apo form of D-alanine: D-alanine ligase (Ddl) from Thermus caldophilus: a basis for the substrate-induced conformational changes==

== Structural highlights ==

<table><tr><td colspan='2'>[[2fb9]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermus_caldophilus Thermus caldophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FB9 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2FB9 FirstGlance]. <br>

</td></tr><tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/D-alanine--D-alanine_ligase D-alanine--D-alanine ligase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=6.3.2.4 6.3.2.4] </span></td></tr>

<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2fb9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fb9 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2fb9 RCSB], [http://www.ebi.ac.uk/pdbsum/2fb9 PDBsum]</span></td></tr>

<table>

== Evolutionary Conservation ==

[[Image:Consurf_key_small.gif|200px|right]]

Check<jmol>

<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fb/2fb9_consurf.spt"</scriptWhenChecked>

<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>

<text>to colour the structure by Evolutionary Conservation</text>

</jmolCheckbox>

</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].

~~{{STRUCTURE_2fb9| PDB~~=~~2fb9 | SCENE~~= }}

==See Also==

*[[D-alanine-D-alanine ligase|D-alanine-D-alanine ligase]]

==~~=Crystal structure of the Apo form of~~ D-alanine: D-alanine ligase ~~(Ddl) from Thermus caldophilus: a basis for the substrate~~-~~induced conformational changes===~~

__TOC__

</StructureSection>

~~==About this Structure==~~

~~[[2fb9~~]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermus_caldophilus Thermus caldophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FB9 OCA].

~~==Reference==~~

~~<ref group="xtra">PMID:016779845</ref>~~<~~references group="xtra"~~/>

[[Category: D-alanine--D-alanine ligase]]

[[Category: Thermus caldophilus]]

Navigation menu

Page actions

Page actions

Personal tools

Navigation

Search

Tools

@@ Line 1: / Line 1: @@
-[[Image:2fb9.png|left|200px]]
+==Crystal structure of the Apo form of D-alanine: D-alanine ligase (Ddl) from Thermus caldophilus: a basis for the substrate-induced conformational changes==
+<StructureSection load='2fb9' size='340' side='right' caption='[[2fb9]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
+== Structural highlights ==
+<table><tr><td colspan='2'>[[2fb9]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermus_caldophilus Thermus caldophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FB9 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2FB9 FirstGlance]. <br>
+</td></tr><tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/D-alanine--D-alanine_ligase D-alanine--D-alanine ligase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=6.3.2.4 6.3.2.4] </span></td></tr>
+<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2fb9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fb9 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2fb9 RCSB], [http://www.ebi.ac.uk/pdbsum/2fb9 PDBsum]</span></td></tr>
+<table>
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fb/2fb9_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+<div style="clear:both"></div>
-{{STRUCTURE_2fb9|  PDB=2fb9  |  SCENE=  }}
+==See Also==
+*[[D-alanine-D-alanine ligase|D-alanine-D-alanine ligase]]
-===Crystal structure of the Apo form of D-alanine: D-alanine ligase (Ddl) from Thermus caldophilus: a basis for the substrate-induced conformational changes===
+__TOC__
+</StructureSection>
-==About this Structure==
-[[2fb9]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermus_caldophilus Thermus caldophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FB9 OCA].
-==Reference==
-<ref group="xtra">PMID:016779845</ref><references group="xtra"/>
 [[Category: D-alanine--D-alanine ligase]]
 [[Category: Thermus caldophilus]]