2vhr: Difference between revisions

Line 1:

~~[[Image:2vhr.png|left|200px]]~~

==Atomic resolution (0.95A) structure of purified thaumatin I grown in sodium L-tartrate at 4 C==

~~{{STRUCTURE_2vhr| PDB=2vhr | SCENE= }}~~

== Structural highlights ==

<table><tr><td colspan='2'>[[2vhr]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Thaumatococcus_daniellii Thaumatococcus daniellii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VHR OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2VHR FirstGlance]. <br>

==~~=ATOMIC RESOLUTION~~ (0.95A) ~~STRUCTURE OF PURIFIED THAUMATIN~~ I ~~GROWN IN SODIUM~~ L-~~TARTRATE AT~~ 4 C===

</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=TLA:L(+)-TARTARIC+ACID'>TLA</scene><br>

<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2vhr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2vhr OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2vhr RCSB], [http://www.ebi.ac.uk/pdbsum/2vhr PDBsum]</span></td></tr>

==~~About this Structure~~==

<table>

[[2vhr]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Thaumatococcus_daniellii Thaumatococcus daniellii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VHR OCA].

== Evolutionary Conservation ==

[[Image:Consurf_key_small.gif|200px|right]]

Check<jmol>

<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vh/2vhr_consurf.spt"</scriptWhenChecked>

<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>

<text>to colour the structure by Evolutionary Conservation</text>

</jmolCheckbox>

</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].

__TOC__

</StructureSection>

[[Category: Thaumatococcus daniellii]]

[[Category: Asherie, N.]]

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@@ Line 1: / Line 1: @@
-[[Image:2vhr.png|left|200px]]
+==Atomic resolution (0.95A) structure of purified thaumatin I grown in sodium L-tartrate at 4 C==
+<StructureSection load='2vhr' size='340' side='right' caption='[[2vhr]], [[Resolution|resolution]] 0.95&Aring;' scene=''>
-{{STRUCTURE_2vhr|  PDB=2vhr  |  SCENE=  }}
+== Structural highlights ==
+<table><tr><td colspan='2'>[[2vhr]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Thaumatococcus_daniellii Thaumatococcus daniellii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VHR OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2VHR FirstGlance]. <br>
-===ATOMIC RESOLUTION (0.95A) STRUCTURE OF PURIFIED THAUMATIN I GROWN IN SODIUM L-TARTRATE AT 4 C===
+</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=TLA:L(+)-TARTARIC+ACID'>TLA</scene><br>
+<tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1kwn|1kwn]], [[1thw|1thw]], [[1rqw|1rqw]], [[1lr2|1lr2]], [[1thv|1thv]], [[2vi1|2vi1]], [[2vi2|2vi2]], [[1lxz|1lxz]], [[2blr|2blr]], [[2d8o|2d8o]], [[2vu6|2vu6]], [[2vi3|2vi3]], [[1thu|1thu]], [[2a7i|2a7i]], [[1lr3|1lr3]], [[1thi|1thi]], [[1ly0|1ly0]], [[1pp3|1pp3]], [[2d8p|2d8p]], [[2vi4|2vi4]], [[2vu7|2vu7]], [[2vhk|2vhk]], [[2blu|2blu]]</td></tr>
+<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2vhr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2vhr OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2vhr RCSB], [http://www.ebi.ac.uk/pdbsum/2vhr PDBsum]</span></td></tr>
-==About this Structure==
+<table>
-[[2vhr]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Thaumatococcus_daniellii Thaumatococcus daniellii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VHR OCA].
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vh/2vhr_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+<div style="clear:both"></div>
+__TOC__
+</StructureSection>
 [[Category: Thaumatococcus daniellii]]
 [[Category: Asherie, N.]]