1o4t: Difference between revisions

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~~[[Image:1o4t.png|left|200px]]~~

==Crystal structure of a predicted oxalate decarboxylase (tm1287) from thermotoga maritima at 1.95 A resolution==

~~{{STRUCTURE_1o4t| PDB=1o4t | SCENE= }}~~

== Structural highlights ==

<table><tr><td colspan='2'>[[1o4t]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1O4T OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1O4T FirstGlance]. <br>

===Crystal structure of a predicted oxalate decarboxylase (tm1287) from thermotoga maritima at 1.95 A resolution===

</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=OXL:OXALATE+ION'>OXL</scene><br>

<tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">TM1287 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2336 Thermotoga maritima])</td></tr>

<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1o4t FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1o4t OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1o4t RCSB], [http://www.ebi.ac.uk/pdbsum/1o4t PDBsum], [http://www.topsan.org/Proteins/JCSG/1o4t TOPSAN]</span></td></tr>

==~~About this Structure~~==

<table>

[[1o4t]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1O4T OCA].

== Evolutionary Conservation ==

[[Image:Consurf_key_small.gif|200px|right]]

==~~Reference~~==

Check<jmol>

<~~ref group~~="~~xtra~~">~~PMID~~:~~015211523~~</~~ref~~><~~references group~~="~~xtra~~"/>

<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/o4/1o4t_consurf.spt"</scriptWhenChecked>

<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>

<text>to colour the structure by Evolutionary Conservation</text>

</jmolCheckbox>

</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].

__TOC__

</StructureSection>

[[Category: Thermotoga maritima]]

[[Category: JCSG, Joint Center for Structural Genomics.]]

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@@ Line 1: / Line 1: @@
-[[Image:1o4t.png|left|200px]]
+==Crystal structure of a predicted oxalate decarboxylase (tm1287) from thermotoga maritima at 1.95 A resolution==
+<StructureSection load='1o4t' size='340' side='right' caption='[[1o4t]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
-{{STRUCTURE_1o4t|  PDB=1o4t  |  SCENE=  }}
+== Structural highlights ==
+<table><tr><td colspan='2'>[[1o4t]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1O4T OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1O4T FirstGlance]. <br>
-===Crystal structure of a predicted oxalate decarboxylase (tm1287) from thermotoga maritima at 1.95 A resolution===
+</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=OXL:OXALATE+ION'>OXL</scene><br>
+<tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">TM1287 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2336 Thermotoga maritima])</td></tr>
+<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1o4t FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1o4t OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1o4t RCSB], [http://www.ebi.ac.uk/pdbsum/1o4t PDBsum], [http://www.topsan.org/Proteins/JCSG/1o4t TOPSAN]</span></td></tr>
-==About this Structure==
+<table>
-[[1o4t]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1O4T OCA].
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
-==Reference==
+Check<jmol>
-<ref group="xtra">PMID:015211523</ref><references group="xtra"/>
+  <jmolCheckbox>
+    <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/o4/1o4t_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+<div style="clear:both"></div>
+__TOC__
+</StructureSection>
 [[Category: Thermotoga maritima]]
 [[Category: JCSG, Joint Center for Structural Genomics.]]