3exa: Difference between revisions
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==Crystal structure of the full-length tRNA isopentenylpyrophosphate transferase (BH2366) from Bacillus halodurans, Northeast Structural Genomics Consortium target BhR41.== | |||
<StructureSection load='3exa' size='340' side='right' caption='[[3exa]], [[Resolution|resolution]] 2.30Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[3exa]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_halodurans Bacillus halodurans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EXA OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3EXA FirstGlance]. <br> | |||
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | |||
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2qgn|2qgn]]</td></tr> | |||
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">BH2366, miaA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=86665 Bacillus halodurans])</td></tr> | |||
== | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/tRNA_dimethylallyltransferase tRNA dimethylallyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.5.1.75 2.5.1.75] </span></td></tr> | ||
[[3exa]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_halodurans Bacillus halodurans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EXA OCA]. | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3exa FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3exa OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3exa RCSB], [http://www.ebi.ac.uk/pdbsum/3exa PDBsum], [http://www.topsan.org/Proteins/NESGC/3exa TOPSAN]</span></td></tr> | ||
</table> | |||
== Evolutionary Conservation == | |||
[[Image:Consurf_key_small.gif|200px|right]] | |||
Check<jmol> | |||
<jmolCheckbox> | |||
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ex/3exa_consurf.spt"</scriptWhenChecked> | |||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |||
<text>to colour the structure by Evolutionary Conservation</text> | |||
</jmolCheckbox> | |||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf]. | |||
<div style="clear:both"></div> | |||
__TOC__ | |||
</StructureSection> | |||
[[Category: Bacillus halodurans]] | [[Category: Bacillus halodurans]] | ||
[[Category: TRNA dimethylallyltransferase]] | [[Category: TRNA dimethylallyltransferase]] | ||
[[Category: Abashidze, M | [[Category: Abashidze, M]] | ||
[[Category: Acton, T B | [[Category: Acton, T B]] | ||
[[Category: Baran, M C | [[Category: Baran, M C]] | ||
[[Category: Cunningham, K | [[Category: Cunningham, K]] | ||
[[Category: Forouhar, F | [[Category: Forouhar, F]] | ||
[[Category: Hunt, J F | [[Category: Hunt, J F]] | ||
[[Category: Janjua, H | [[Category: Janjua, H]] | ||
[[Category: Liu, J | [[Category: Liu, J]] | ||
[[Category: Ma, L-.C | [[Category: Ma, L-.C]] | ||
[[Category: Montelione, G T | [[Category: Montelione, G T]] | ||
[[Category: | [[Category: Structural genomic]] | ||
[[Category: Neely, H | [[Category: Neely, H]] | ||
[[Category: Rost, B | [[Category: Rost, B]] | ||
[[Category: Seetharaman, J | [[Category: Seetharaman, J]] | ||
[[Category: Shastry, R | [[Category: Shastry, R]] | ||
[[Category: Tong, L | [[Category: Tong, L]] | ||
[[Category: Xiao, R | [[Category: Xiao, R]] | ||
[[Category: Alpha-beta protein]] | [[Category: Alpha-beta protein]] | ||
[[Category: Atp-binding]] | [[Category: Atp-binding]] | ||
[[Category: Nesg]] | [[Category: Nesg]] | ||
[[Category: Nucleotide-binding]] | [[Category: Nucleotide-binding]] | ||
[[Category: Nucleotidyltransferase]] | [[Category: Nucleotidyltransferase]] | ||
[[Category: Protein structure initiative | [[Category: PSI, Protein structure initiative]] | ||
[[Category: Transferase]] | [[Category: Transferase]] | ||
[[Category: Trna processing]] | [[Category: Trna processing]] | ||
Revision as of 08:53, 26 November 2014
Crystal structure of the full-length tRNA isopentenylpyrophosphate transferase (BH2366) from Bacillus halodurans, Northeast Structural Genomics Consortium target BhR41.
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Proteopedia Page Contributors and Editors (what is this?)
Categories:
- Bacillus halodurans
- TRNA dimethylallyltransferase
- Abashidze, M
- Acton, T B
- Baran, M C
- Cunningham, K
- Forouhar, F
- Hunt, J F
- Janjua, H
- Liu, J
- Ma, L-.C
- Montelione, G T
- Structural genomic
- Neely, H
- Rost, B
- Seetharaman, J
- Shastry, R
- Tong, L
- Xiao, R
- Alpha-beta protein
- Atp-binding
- Nesg
- Nucleotide-binding
- Nucleotidyltransferase
- PSI, Protein structure initiative
- Transferase
- Trna processing
