3f2i: Difference between revisions

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{{Seed}}
==Crystal structure of the alr0221 protein from Nostoc, Northeast Structural Genomics Consortium Target NsR422.==
[[Image:3f2i.jpg|left|200px]]
<StructureSection load='3f2i' size='340' side='right' caption='[[3f2i]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
 
== Structural highlights ==
<!--
<table><tr><td colspan='2'>[[3f2i]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Nostoc_sp. Nostoc sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3F2I OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3F2I FirstGlance]. <br>
The line below this paragraph, containing "STRUCTURE_3f2i", creates the "Structure Box" on the page.
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">alr0221 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1180 Nostoc sp.])</td></tr>
or leave the SCENE parameter empty for the default display.
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3f2i FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3f2i OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3f2i RCSB], [http://www.ebi.ac.uk/pdbsum/3f2i PDBsum], [http://www.topsan.org/Proteins/NESGC/3f2i TOPSAN]</span></td></tr>
-->
</table>
{{STRUCTURE_3f2i|  PDB=3f2i  |  SCENE=  }}
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
===Crystal structure of the alr0221 protein from Nostoc, Northeast Structural Genomics Consortium Target NsR422.===
Check<jmol>
 
  <jmolCheckbox>
 
    <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/f2/3f2i_consurf.spt"</scriptWhenChecked>
==About this Structure==
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
3F2I is a 6 chains structure of sequences from [http://en.wikipedia.org/wiki/Nostoc_sp._pcc_7120 Nostoc sp. pcc 7120]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3F2I OCA].  
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Nostoc sp. pcc 7120]]
  </jmolCheckbox>
[[Category: Acton, T B.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
[[Category: Belote, R L.]]
<div style="clear:both"></div>
[[Category: Ciccosanti, C.]]
__TOC__
[[Category: Everett, J K.]]
</StructureSection>
[[Category: Foote, E L.]]
[[Category: Nostoc sp]]
[[Category: Forouhar, F.]]
[[Category: Acton, T B]]
[[Category: Hunt, J F.]]
[[Category: Belote, R L]]
[[Category: Lew, S.]]
[[Category: Ciccosanti, C]]
[[Category: Montelione, G T.]]
[[Category: Everett, J K]]
[[Category: NESG, Northeast Structural Genomics Consortium.]]
[[Category: Foote, E L]]
[[Category: Nair, R.]]
[[Category: Forouhar, F]]
[[Category: Rost, B.]]
[[Category: Hunt, J F]]
[[Category: Sahdev, S.]]
[[Category: Lew, S]]
[[Category: Seetharaman, J.]]
[[Category: Montelione, G T]]
[[Category: Tong, L.]]
[[Category: Structural genomic]]
[[Category: Xiao, R.]]
[[Category: Nair, R]]
[[Category: Rost, B]]
[[Category: Sahdev, S]]
[[Category: Seetharaman, J]]
[[Category: Tong, L]]
[[Category: Xiao, R]]
[[Category: Alpha-beta protein]]
[[Category: Alpha-beta protein]]
[[Category: Nesg]]
[[Category: Nesg]]
[[Category: Northeast structural genomics consortium]]
[[Category: PSI, Protein structure initiative]]
[[Category: Protein structure initiative]]
[[Category: Psi-2]]
[[Category: Structural genomic]]
[[Category: Unknown function]]
[[Category: Unknown function]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Nov 20 07:48:57 2008''
Retrieved from "https://proteopedia.org/3f2i"