3guy: Difference between revisions
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==Crystal structure of a short-chain dehydrogenase/reductase from Vibrio parahaemolyticus== | |||
<StructureSection load='3guy' size='340' side='right' caption='[[3guy]], [[Resolution|resolution]] 1.90Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[3guy]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Vibrio_parahaemolyticus Vibrio parahaemolyticus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GUY OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3GUY FirstGlance]. <br> | |||
</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">A79_5576 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=670 Vibrio parahaemolyticus])</td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3guy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3guy OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3guy RCSB], [http://www.ebi.ac.uk/pdbsum/3guy PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/3guy TOPSAN]</span></td></tr> | |||
</table> | |||
== | == Evolutionary Conservation == | ||
[[3guy]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Vibrio_parahaemolyticus Vibrio parahaemolyticus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GUY OCA]. | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | |||
<jmolCheckbox> | |||
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gu/3guy_consurf.spt"</scriptWhenChecked> | |||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |||
<text>to colour the structure by Evolutionary Conservation</text> | |||
</jmolCheckbox> | |||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf]. | |||
<div style="clear:both"></div> | |||
__TOC__ | |||
</StructureSection> | |||
[[Category: Vibrio parahaemolyticus]] | [[Category: Vibrio parahaemolyticus]] | ||
[[Category: Almo, S C | [[Category: Almo, S C]] | ||
[[Category: Bain, K T | [[Category: Bain, K T]] | ||
[[Category: Bonanno, J B | [[Category: Bonanno, J B]] | ||
[[Category: Burley, S K | [[Category: Burley, S K]] | ||
[[Category: Freeman, J | [[Category: Freeman, J]] | ||
[[Category: Miller, S | [[Category: Miller, S]] | ||
[[Category: | [[Category: Structural genomic]] | ||
[[Category: Patskovsky, Y | [[Category: Patskovsky, Y]] | ||
[[Category: Sampathkumar, P | [[Category: Sampathkumar, P]] | ||
[[Category: Sauder, J M | [[Category: Sauder, J M]] | ||
[[Category: Wasserman, S | [[Category: Wasserman, S]] | ||
[[Category: New | [[Category: NYSGXRC, New York SGX Research Center for Structural Genomics]] | ||
[[Category: Oxidoreductase]] | [[Category: Oxidoreductase]] | ||
[[Category: Protein structure initiative | [[Category: PSI, Protein structure initiative]] | ||
Revision as of 13:26, 6 November 2014
Crystal structure of a short-chain dehydrogenase/reductase from Vibrio parahaemolyticus
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