3hmu: Difference between revisions
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==Crystal structure of a class III aminotransferase from Silicibacter pomeroyi== | |||
<StructureSection load='3hmu' size='340' side='right' caption='[[3hmu]], [[Resolution|resolution]] 2.10Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[3hmu]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Ruegeria_pomeroyi Ruegeria pomeroyi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HMU OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3HMU FirstGlance]. <br> | |||
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | |||
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">SPO3471 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=89184 Ruegeria pomeroyi])</td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3hmu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3hmu OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3hmu RCSB], [http://www.ebi.ac.uk/pdbsum/3hmu PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/3hmu TOPSAN]</span></td></tr> | |||
== | </table> | ||
[[3hmu]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Ruegeria_pomeroyi Ruegeria pomeroyi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HMU OCA]. | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | |||
Check<jmol> | |||
<jmolCheckbox> | |||
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hm/3hmu_consurf.spt"</scriptWhenChecked> | |||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |||
<text>to colour the structure by Evolutionary Conservation</text> | |||
</jmolCheckbox> | |||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf]. | |||
<div style="clear:both"></div> | |||
__TOC__ | |||
</StructureSection> | |||
[[Category: Ruegeria pomeroyi]] | [[Category: Ruegeria pomeroyi]] | ||
[[Category: Almo, S C | [[Category: Almo, S C]] | ||
[[Category: Bain, K T | [[Category: Bain, K T]] | ||
[[Category: Bonanno, J B | [[Category: Bonanno, J B]] | ||
[[Category: Burley, S K | [[Category: Burley, S K]] | ||
[[Category: Freeman, J | [[Category: Freeman, J]] | ||
[[Category: Miller, S | [[Category: Miller, S]] | ||
[[Category: | [[Category: Structural genomic]] | ||
[[Category: Ramagopal, U | [[Category: Ramagopal, U]] | ||
[[Category: Sauder, J M | [[Category: Sauder, J M]] | ||
[[Category: Toro, R | [[Category: Toro, R]] | ||
[[Category: Aminotransferase]] | [[Category: Aminotransferase]] | ||
[[Category: New | [[Category: NYSGXRC, New York SGX Research Center for Structural Genomics]] | ||
[[Category: PSI, Protein structure initiative]] | |||
[[Category: Protein structure initiative | |||
[[Category: Pyridoxal phosphate]] | [[Category: Pyridoxal phosphate]] | ||
[[Category: Transferase]] | [[Category: Transferase]] | ||
