1o6y: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
Line 5: Line 5:


==Overview==
==Overview==
With the advent of the sequencing programs of prokaryotic genomes, many, examples of the presence of serine/threonine protein kinases in these, organisms have been identified. Moreover, these kinases could be, classified as homologues of those belonging to the well characterized, superfamily of the eukaryotic serine/threonine and tyrosine kinases., Eleven such kinases were recognized in the genome of Mycobacterium, tuberculosis. Here we report the crystal structure of an active form of, PknB, one of the four M. tuberculosis kinases that are conserved in the, downsized genome of Mycobacterium leprae and are therefore presumed to, play an important role in the processes that regulate the complex life, cycle of mycobacteria. Our structure confirms again the extraordinary, conservation of the ... [[http://ispc.weizmann.ac.il/pmbin/getpm?12551895 (full description)]]
With the advent of the sequencing programs of prokaryotic genomes, many, examples of the presence of serine/threonine protein kinases in these, organisms have been identified. Moreover, these kinases could be, classified as homologues of those belonging to the well characterized, superfamily of the eukaryotic serine/threonine and tyrosine kinases., Eleven such kinases were recognized in the genome of Mycobacterium, tuberculosis. Here we report the crystal structure of an active form of, PknB, one of the four M. tuberculosis kinases that are conserved in the, downsized genome of Mycobacterium leprae and are therefore presumed to, play an important role in the processes that regulate the complex life, cycle of mycobacteria. Our structure confirms again the extraordinary, conservation of the protein kinase fold and constitutes a landmark that, extends this conservation across the evolutionary distance between high, eukaryotes and eubacteria. The structure of PknB, in complex with a, nucleotide triphosphate analog, reveals an enzyme in the active state with, an unprecedented arrangement of the Gly-rich loop associated with a new, conformation of the nucleotide gamma-phosphoryl group. It presents as well, a partially disordered activation loop, suggesting an induced fit mode of, binding for the so far unknown substrates of this kinase or for some, modulating factor(s).


==About this Structure==
==About this Structure==
1O6Y is a [[http://en.wikipedia.org/wiki/Single_protein Single protein]] structure of sequence from [[http://en.wikipedia.org/wiki/Mycobacterium_tuberculosis Mycobacterium tuberculosis]] with MG and ACP as [[http://en.wikipedia.org/wiki/ligands ligands]]. Active as [[http://en.wikipedia.org/wiki/Transferred_entry:_2.7.11.1 Transferred entry: 2.7.11.1]], with EC number [[http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.1.37 2.7.1.37]]. Structure known Active Site: ACP. Full crystallographic information is available from [[http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1O6Y OCA]].  
1O6Y is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Mycobacterium_tuberculosis Mycobacterium tuberculosis] with MG and ACP as [http://en.wikipedia.org/wiki/ligands ligands]. Active as [http://en.wikipedia.org/wiki/Transferred_entry:_2.7.11.1 Transferred entry: 2.7.11.1], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.1.37 2.7.1.37] Structure known Active Site: ACP. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1O6Y OCA].  


==Reference==
==Reference==
Line 30: Line 30:
[[Category: transferase]]
[[Category: transferase]]


''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Tue Oct 30 15:44:51 2007''
''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Mon Nov  5 12:50:42 2007''