2bee: Difference between revisions

Line 1:

[[Image:2bee.gif|left|200px]]~~<br /><applet load~~="2bee~~" size~~="350~~" color~~=~~"white" frame~~=~~"true" align="right" spinBox="true"~~

[[Image:2bee.gif|left|200px]]

~~caption="~~2bee, resolution 2.6Å" />

'''Complex Between Paromomycin derivative JS4 and the 16S-Rrna A Site'''~~<br />~~

{{Structure

|PDB= 2bee |SIZE=350|CAPTION= <scene name='initialview01'>2bee</scene>, resolution 2.6Å

|SITE=

|LIGAND= <scene name='pdbligand=JS4:(2S,3S,4R,5R,6R)-5-AMINO-2-(AMINOMETHYL)-6-((2R,3R,4R,5S)-4-(2-(3-AMINOPROPYLAMINO)ETHOXY)-5-((1R,2R,3S,5R,6S)-3,5-DIAMINO-2-((2S,3R,4R,5S,6R)-3-AMINO-4,5-DIHYDROXY-6-(HYDROXYMETHYL)-TETRAHYDRO-2H-PYRAN-2-YLOXY)-6-HYDROXYCYCLOHEXYLOXY)-2-(HYDROXYMETHYL)-TETRAHYDROFURAN-3-YLOXY)-TETRAHYDRO-2H-PYRAN-3,4-DIOL'>JS4</scene>

|ACTIVITY=

|GENE=

}}

'''Complex Between Paromomycin derivative JS4 and the 16S-Rrna A Site'''

==About this Structure==

2BEE is a [~~http://en.wikipedia.org/wiki/Protein_complex~~ Protein complex] structure of sequences from [http://en.wikipedia.org/wiki/ ~~] with <scene name='pdbligand=JS4:'>JS4</scene> as [http://en.wikipedia.org/wiki/ligand ligand~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BEE OCA].

2BEE is a [[Protein complex]] structure of sequences from [http://en.wikipedia.org/wiki/ ]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BEE OCA].

==Reference==

Antibacterial aminoglycosides with a modified mode of binding to the ribosomal-RNA decoding site., Francois B, Szychowski J, Adhikari SS, Pachamuthu K, Swayze EE, Griffey RH, Migawa MT, Westhof E, Hanessian S, Angew Chem Int Ed Engl. 2004 Dec 10;43(48):6735-8. PMID:[http://~~ispc~~.~~weizmann~~.ac.~~il/~~/~~pmbin~~/~~getpm?pmid=~~15593140 15593140]

Antibacterial aminoglycosides with a modified mode of binding to the ribosomal-RNA decoding site., Francois B, Szychowski J, Adhikari SS, Pachamuthu K, Swayze EE, Griffey RH, Migawa MT, Westhof E, Hanessian S, Angew Chem Int Ed Engl. 2004 Dec 10;43(48):6735-8. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/15593140 15593140]

[[Category: Protein complex]]

[[Category: Francois, B.]]

Line 13:

Line 22:

[[Category: JS4]]

[[Category: a site]]

[[Category: aa ~~bulges~~]]

[[Category: aa bulge]]

[[Category: rna-aminoglycoside ~~interactions~~]]

[[Category: rna-aminoglycoside interaction]]

[[Category: uou ~~pairs~~]]

[[Category: uou pair]]

''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu ~~Feb 21~~ 16:37:02 2008''

''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 16:00:50 2008''

Navigation menu

Page actions

Page actions

Personal tools

Navigation

Search

Tools

@@ Line 1: / Line 1: @@
-[[Image:2bee.gif|left|200px]]<br /><applet load="2bee" size="350" color="white" frame="true" align="right" spinBox="true"
+[[Image:2bee.gif|left|200px]]
-caption="2bee, resolution 2.6&Aring;" />
-'''Complex Between Paromomycin derivative JS4 and the 16S-Rrna A Site'''<br />
+ {{Structure
+|PDB= 2bee |SIZE=350|CAPTION= <scene name='initialview01'>2bee</scene>, resolution 2.6&Aring;
+|SITE=
+|LIGAND= <scene name='pdbligand=JS4:(2S,3S,4R,5R,6R)-5-AMINO-2-(AMINOMETHYL)-6-((2R,3R,4R,5S)-4-(2-(3-AMINOPROPYLAMINO)ETHOXY)-5-((1R,2R,3S,5R,6S)-3,5-DIAMINO-2-((2S,3R,4R,5S,6R)-3-AMINO-4,5-DIHYDROXY-6-(HYDROXYMETHYL)-TETRAHYDRO-2H-PYRAN-2-YLOXY)-6-HYDROXYCYCLOHEXYLOXY)-2-(HYDROXYMETHYL)-TETRAHYDROFURAN-3-YLOXY)-TETRAHYDRO-2H-PYRAN-3,4-DIOL'>JS4</scene>
+|ACTIVITY=
+|GENE=
+}}
+'''Complex Between Paromomycin derivative JS4 and the 16S-Rrna A Site'''
 ==About this Structure==
-BEE is a [http://en.wikipedia.org/wiki/Protein_complex Protein complex] structure of sequences from [http://en.wikipedia.org/wiki/ ] with <scene name='pdbligand=JS4:'>JS4</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BEE OCA].
+BEE is a [[Protein complex]] structure of sequences from [http://en.wikipedia.org/wiki/ ]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BEE OCA].
 ==Reference==
-Antibacterial aminoglycosides with a modified mode of binding to the ribosomal-RNA decoding site., Francois B, Szychowski J, Adhikari SS, Pachamuthu K, Swayze EE, Griffey RH, Migawa MT, Westhof E, Hanessian S, Angew Chem Int Ed Engl. 2004 Dec 10;43(48):6735-8. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=15593140 15593140]
+Antibacterial aminoglycosides with a modified mode of binding to the ribosomal-RNA decoding site., Francois B, Szychowski J, Adhikari SS, Pachamuthu K, Swayze EE, Griffey RH, Migawa MT, Westhof E, Hanessian S, Angew Chem Int Ed Engl. 2004 Dec 10;43(48):6735-8. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/15593140 15593140]
 [[Category: Protein complex]]
 [[Category: Francois, B.]]
@@ Line 13: / Line 22: @@
 [[Category: JS4]]
 [[Category: a site]]
-[[Category: aa bulges]]
+[[Category: aa bulge]]
-[[Category: rna-aminoglycoside interactions]]
+[[Category: rna-aminoglycoside interaction]]
-[[Category: uou pairs]]
+[[Category: uou pair]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 16:37:02 2008''
+''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 16:00:50 2008''