3i8b: Difference between revisions
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==The crystal structure of xylulose kinase from Bifidobacterium adolescentis== | |||
<StructureSection load='3i8b' size='340' side='right' caption='[[3i8b]], [[Resolution|resolution]] 2.00Å' scene=''> | |||
== Structural highlights == | |||
== | <table><tr><td colspan='2'>[[3i8b]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bifidobacterium_adolescentis_atcc_15703 Bifidobacterium adolescentis atcc 15703]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3I8B OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3I8B FirstGlance]. <br> | ||
[[3i8b]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bifidobacterium_adolescentis_atcc_15703 Bifidobacterium adolescentis atcc 15703]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3I8B OCA]. | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr> | ||
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | |||
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">xylB ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=367928 Bifidobacterium adolescentis ATCC 15703])</td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3i8b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3i8b OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3i8b RCSB], [http://www.ebi.ac.uk/pdbsum/3i8b PDBsum]</span></td></tr> | |||
</table> | |||
== Evolutionary Conservation == | |||
[[Image:Consurf_key_small.gif|200px|right]] | |||
Check<jmol> | |||
<jmolCheckbox> | |||
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/i8/3i8b_consurf.spt"</scriptWhenChecked> | |||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |||
<text>to colour the structure by Evolutionary Conservation</text> | |||
</jmolCheckbox> | |||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf]. | |||
<div style="clear:both"></div> | |||
__TOC__ | |||
</StructureSection> | |||
[[Category: Bifidobacterium adolescentis atcc 15703]] | [[Category: Bifidobacterium adolescentis atcc 15703]] | ||
[[Category: Burley, S K | [[Category: Burley, S K]] | ||
[[Category: | [[Category: Structural genomic]] | ||
[[Category: Swaminathan, S | [[Category: Swaminathan, S]] | ||
[[Category: Zhang, Z | [[Category: Zhang, Z]] | ||
[[Category: Bifidobacterium adolescenti]] | [[Category: Bifidobacterium adolescenti]] | ||
[[Category: Kinase]] | [[Category: Kinase]] | ||
[[Category: New | [[Category: NYSGXRC, New York SGX Research Center for Structural Genomics]] | ||
[[Category: PSI, Protein structure initiative]] | |||
[[Category: Protein structure initiative | |||
[[Category: Strain atcc 15703 / dsm 20083]] | [[Category: Strain atcc 15703 / dsm 20083]] | ||
[[Category: Transferase]] | [[Category: Transferase]] | ||
[[Category: Xylulose kinase]] | [[Category: Xylulose kinase]] | ||
