2dvn: Difference between revisions

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[[Image:2dvn.jpg|left|200px]]<br /><applet load="2dvn" size="350" color="white" frame="true" align="right" spinBox="true"
[[Image:2dvn.jpg|left|200px]]
caption="2dvn, resolution 1.60&Aring;" />
 
'''Structure of PH1917 protein with the complex of IMP from Pyrococcus horikoshii'''<br />
{{Structure
|PDB= 2dvn |SIZE=350|CAPTION= <scene name='initialview01'>2dvn</scene>, resolution 1.60&Aring;
|SITE= <scene name='pdbsite=AC1:So4+Binding+Site+For+Residue+A+1202'>AC1</scene>, <scene name='pdbsite=AC2:So4+Binding+Site+For+Residue+A+1203'>AC2</scene>, <scene name='pdbsite=AC3:So4+Binding+Site+For+Residue+A+1204'>AC3</scene>, <scene name='pdbsite=AC4:So4+Binding+Site+For+Residue+B+1205'>AC4</scene>, <scene name='pdbsite=AC5:So4+Binding+Site+For+Residue+B+1206'>AC5</scene>, <scene name='pdbsite=AC6:So4+Binding+Site+For+Residue+A+1207'>AC6</scene>, <scene name='pdbsite=AC7:So4+Binding+Site+For+Residue+A+1208'>AC7</scene>, <scene name='pdbsite=AC8:So4+Binding+Site+For+Residue+B+1209'>AC8</scene>, <scene name='pdbsite=AC9:So4+Binding+Site+For+Residue+B+1210'>AC9</scene>, <scene name='pdbsite=BC1:So4+Binding+Site+For+Residue+A+1211'>BC1</scene>, <scene name='pdbsite=BC2:So4+Binding+Site+For+Residue+A+1212'>BC2</scene>, <scene name='pdbsite=BC3:So4+Binding+Site+For+Residue+A+1213'>BC3</scene>, <scene name='pdbsite=BC4:So4+Binding+Site+For+Residue+A+1214'>BC4</scene>, <scene name='pdbsite=BC5:Imp+Binding+Site+For+Residue+A+1301'>BC5</scene>, <scene name='pdbsite=BC6:Imp+Binding+Site+For+Residue+B+1302'>BC6</scene>, <scene name='pdbsite=BC7:Gol+Binding+Site+For+Residue+A+1431'>BC7</scene>, <scene name='pdbsite=BC8:Gol+Binding+Site+For+Residue+B+1432'>BC8</scene> and <scene name='pdbsite=BC9:Gol+Binding+Site+For+Residue+A+1433'>BC9</scene>
|LIGAND= <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=IMP:INOSINIC+ACID'>IMP</scene> and <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>
|ACTIVITY=
|GENE=
}}
 
'''Structure of PH1917 protein with the complex of IMP from Pyrococcus horikoshii'''
 


==Overview==
==Overview==
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==About this Structure==
==About this Structure==
2DVN is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii] with <scene name='pdbligand=SO4:'>SO4</scene>, <scene name='pdbligand=IMP:'>IMP</scene> and <scene name='pdbligand=GOL:'>GOL</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Known structural/functional Sites: <scene name='pdbsite=AC1:So4+Binding+Site+For+Residue+A+1202'>AC1</scene>, <scene name='pdbsite=AC2:So4+Binding+Site+For+Residue+A+1203'>AC2</scene>, <scene name='pdbsite=AC3:So4+Binding+Site+For+Residue+A+1204'>AC3</scene>, <scene name='pdbsite=AC4:So4+Binding+Site+For+Residue+B+1205'>AC4</scene>, <scene name='pdbsite=AC5:So4+Binding+Site+For+Residue+B+1206'>AC5</scene>, <scene name='pdbsite=AC6:So4+Binding+Site+For+Residue+A+1207'>AC6</scene>, <scene name='pdbsite=AC7:So4+Binding+Site+For+Residue+A+1208'>AC7</scene>, <scene name='pdbsite=AC8:So4+Binding+Site+For+Residue+B+1209'>AC8</scene>, <scene name='pdbsite=AC9:So4+Binding+Site+For+Residue+B+1210'>AC9</scene>, <scene name='pdbsite=BC1:So4+Binding+Site+For+Residue+A+1211'>BC1</scene>, <scene name='pdbsite=BC2:So4+Binding+Site+For+Residue+A+1212'>BC2</scene>, <scene name='pdbsite=BC3:So4+Binding+Site+For+Residue+A+1213'>BC3</scene>, <scene name='pdbsite=BC4:So4+Binding+Site+For+Residue+A+1214'>BC4</scene>, <scene name='pdbsite=BC5:Imp+Binding+Site+For+Residue+A+1301'>BC5</scene>, <scene name='pdbsite=BC6:Imp+Binding+Site+For+Residue+B+1302'>BC6</scene>, <scene name='pdbsite=BC7:Gol+Binding+Site+For+Residue+A+1431'>BC7</scene>, <scene name='pdbsite=BC8:Gol+Binding+Site+For+Residue+B+1432'>BC8</scene> and <scene name='pdbsite=BC9:Gol+Binding+Site+For+Residue+A+1433'>BC9</scene>. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DVN OCA].  
2DVN is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DVN OCA].  


==Reference==
==Reference==
Structures of dimeric nonstandard nucleotide triphosphate pyrophosphatase from Pyrococcus horikoshii OT3: functional significance of interprotomer conformational changes., Lokanath NK, Pampa KJ, Takio K, Kunishima N, J Mol Biol. 2008 Jan 25;375(4):1013-25. Epub 2007 Nov 13. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=18062990 18062990]
Structures of dimeric nonstandard nucleotide triphosphate pyrophosphatase from Pyrococcus horikoshii OT3: functional significance of interprotomer conformational changes., Lokanath NK, Pampa KJ, Takio K, Kunishima N, J Mol Biol. 2008 Jan 25;375(4):1013-25. Epub 2007 Nov 13. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/18062990 18062990]
[[Category: Pyrococcus horikoshii]]
[[Category: Pyrococcus horikoshii]]
[[Category: Single protein]]
[[Category: Single protein]]
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[[Category: hydrolase]]
[[Category: hydrolase]]
[[Category: imp]]
[[Category: imp]]
[[Category: national project on protein structural and functional analyses]]
[[Category: national project on protein structural and functional analyse]]
[[Category: nppsfa]]
[[Category: nppsfa]]
[[Category: ntpase]]
[[Category: ntpase]]
[[Category: riken structural genomics/proteomics initiative]]
[[Category: riken structural genomics/proteomics initiative]]
[[Category: rsgi]]
[[Category: rsgi]]
[[Category: structural genomics]]
[[Category: structural genomic]]


''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 17:03:10 2008''
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 16:32:10 2008''
Retrieved from "https://proteopedia.org/2dvn"