3ll3: Difference between revisions
From Proteopedia
Jump to navigationJump to search
m Protected "3ll3" [edit=sysop:move=sysop] |
No edit summary |
||
| Line 1: | Line 1: | ||
==The crystal structure of ligand bound xylulose kinase from Lactobacillus acidophilus== | |||
<StructureSection load='3ll3' size='340' side='right' caption='[[3ll3]], [[Resolution|resolution]] 2.00Å' scene=''> | |||
== Structural highlights == | |||
== | <table><tr><td colspan='2'>[[3ll3]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Lactobacillus_acidophilus Lactobacillus acidophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LL3 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3LL3 FirstGlance]. <br> | ||
[[3ll3]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Lactobacillus_acidophilus Lactobacillus acidophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LL3 OCA]. | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=DXP:1-DEOXY-D-XYLULOSE-5-PHOSPHATE'>DXP</scene>, <scene name='pdbligand=XUL:D-XYLULOSE'>XUL</scene></td></tr> | ||
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | |||
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3gbt|3gbt]]</td></tr> | |||
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">LBA0354 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1579 Lactobacillus acidophilus])</td></tr> | |||
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Gluconokinase Gluconokinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.1.12 2.7.1.12] </span></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ll3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ll3 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3ll3 RCSB], [http://www.ebi.ac.uk/pdbsum/3ll3 PDBsum]</span></td></tr> | |||
</table> | |||
== Evolutionary Conservation == | |||
[[Image:Consurf_key_small.gif|200px|right]] | |||
Check<jmol> | |||
<jmolCheckbox> | |||
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ll/3ll3_consurf.spt"</scriptWhenChecked> | |||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |||
<text>to colour the structure by Evolutionary Conservation</text> | |||
</jmolCheckbox> | |||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf]. | |||
<div style="clear:both"></div> | |||
__TOC__ | |||
</StructureSection> | |||
[[Category: Gluconokinase]] | [[Category: Gluconokinase]] | ||
[[Category: Lactobacillus acidophilus]] | [[Category: Lactobacillus acidophilus]] | ||
[[Category: 11120e1]] | [[Category: 11120e1]] | ||
[[Category: Adp]] | [[Category: Adp]] | ||
[[Category: Kinase]] | [[Category: Kinase]] | ||
[[Category: Nysgx]] | [[Category: Nysgx]] | ||
[[Category: Transferase]] | [[Category: Transferase]] | ||
[[Category: Xylulose]] | [[Category: Xylulose]] | ||
[[Category: Xylulose kinase]] | [[Category: Xylulose kinase]] | ||
