3mp2: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
m Protected "3mp2" [edit=sysop:move=sysop]
(No difference)

Revision as of 21:01, 17 April 2013

Template:STRUCTURE 3mp2

Crystal structure of transmissible gastroenteritis virus papain-like protease 1

Template:ABSTRACT PUBMED 20668092

Function

[R1A_CVPPU] The papain-like proteinase 1 (PLP1) and papain-like proteinase 2 (PLP2) are responsible for the cleavages located at the N-terminus of the replicase polyprotein. In addition, PLP2 possesses a deubiquitinating/deISGylating activity and processes both 'Lys-48'- and 'Lys-63'-linked polyubiquitin chains from cellular substrates. PLP2 also antagonizes innate immune induction of type I interferon by blocking the nuclear translocation of host IRF-3 (By similarity). The main proteinase 3CL-PRO is responsible for the majority of cleavages as it cleaves the C-terminus of replicase polyprotein at 11 sites. Recognizes substrates containing the core sequence [ILMVF]-Q-|-[SAGC]. Inhibited by the substrate-analog Cbz-Val-Asn-Ser-Thr-Leu-Gln-CMK. Nsp7-nsp8 hexadecamer may possibly confer processivity to the polymerase, maybe by binding to dsRNA or by producing primers utilized by the latter (By similarity). Nsp9 is a ssRNA-binding protein (By similarity).

About this Structure

3mp2 is a 1 chain structure with sequence from Transmissible gastroenteritis virus. Full crystallographic information is available from OCA.

Reference

  1. Wojdyla JA, Manolaridis I, van Kasteren PB, Kikkert M, Snijder EJ, Gorbalenya AE, Tucker PA. Papain-Like Protease 1 from Transmissible Gastroenteritis Virus: Crystal Structure and Enzymatic Activity toward Viral and Cellular Substrates. J Virol. 2010 Oct;84(19):10063-73. Epub 2010 Jul 28. PMID:20668092 doi:10.1128/JVI.00898-10

Proteopedia Page Contributors and Editors (what is this?)

OCA