3pva: Difference between revisions

Line 1:

~~{{STRUCTURE_3pva| PDB=3pva | SCENE= }}~~

==PENICILLIN V ACYLASE FROM B. SPHAERICUS==

===PENICILLIN V ACYLASE FROM B. SPHAERICUS===

== Structural highlights ==

==~~Function~~==

<table><tr><td colspan='2'>[[3pva]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Lysinibacillus_sphaericus Lysinibacillus sphaericus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PVA OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3PVA FirstGlance]. <br>

[[~~http://www.uniprot.org/uniprot/PAC_BACSH PAC_BACSH~~]] ~~The enzyme catalyzes the conversion of penicillin to 6-aminopenicillanate The precursor~~, ~~furthermore, acts as a self-processing peptidase that cleaves off the propeptide~~. ~~All peptidase activity is lost on conversion to the mature peptidase.~~

</td></tr><tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Penicillin_amidase Penicillin amidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.1.11 3.5.1.11] </span></td></tr>

<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3pva FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3pva OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3pva RCSB], [http://www.ebi.ac.uk/pdbsum/3pva PDBsum]</span></td></tr>

==~~About this Structure~~==

</table>

[[3pva]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Lysinibacillus_sphaericus Lysinibacillus sphaericus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PVA OCA].

== Evolutionary Conservation ==

[[Image:Consurf_key_small.gif|200px|right]]

Check<jmol>

<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pv/3pva_consurf.spt"</scriptWhenChecked>

<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>

<text>to colour the structure by Evolutionary Conservation</text>

</jmolCheckbox>

</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].

==See Also==

*[[Penicillin acylase|Penicillin acylase]]

__TOC__

~~==Reference==~~

</StructureSection>

~~<ref group="xtra">PMID:010331865</ref><references group="xtra"/>~~<~~references~~/>

[[Category: Lysinibacillus sphaericus]]

[[Category: Penicillin amidase]]

[[Category: Brannigan, J A.]]

[[Category: Brannigan, J A]]

[[Category: Dauter, Z.]]

[[Category: Dauter, Z]]

[[Category: Dodson, E J.]]

[[Category: Dodson, E J]]

[[Category: Dodson, G G.]]

[[Category: Dodson, G G]]

[[Category: Mcvey, C E.]]

[[Category: Mcvey, C E]]

[[Category: Pundle, A V.]]

[[Category: Pundle, A V]]

[[Category: Rao, K N.]]

[[Category: Rao, K N]]

[[Category: Sivaraman, H.]]

[[Category: Sivaraman, H]]

[[Category: Suresh, C G.]]

[[Category: Suresh, C G]]

[[Category: Verma, C S.]]

[[Category: Verma, C S]]

[[Category: Amidohydrolase]]

[[Category: Hydrolase]]

[[Category: Ntn hydrolase]]

[[Category: Penicillin v acylase]]

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@@ Line 1: / Line 1: @@
-{{STRUCTURE_3pva|  PDB=3pva  |  SCENE=  }}
+==PENICILLIN V ACYLASE FROM B. SPHAERICUS==
-===PENICILLIN V ACYLASE FROM B. SPHAERICUS===
+<StructureSection load='3pva' size='340' side='right' caption='[[3pva]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
+== Structural highlights ==
-==Function==
+<table><tr><td colspan='2'>[[3pva]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Lysinibacillus_sphaericus Lysinibacillus sphaericus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PVA OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3PVA FirstGlance]. <br>
-[[http://www.uniprot.org/uniprot/PAC_BACSH PAC_BACSH]] The enzyme catalyzes the conversion of penicillin to 6-aminopenicillanate The precursor, furthermore, acts as a self-processing peptidase that cleaves off the propeptide. All peptidase activity is lost on conversion to the mature peptidase.
+</td></tr><tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Penicillin_amidase Penicillin amidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.1.11 3.5.1.11] </span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3pva FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3pva OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3pva RCSB], [http://www.ebi.ac.uk/pdbsum/3pva PDBsum]</span></td></tr>
-==About this Structure==
+</table>
-[[3pva]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Lysinibacillus_sphaericus Lysinibacillus sphaericus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PVA OCA].
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pv/3pva_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+<div style="clear:both"></div>
 ==See Also==
 *[[Penicillin acylase|Penicillin acylase]]
+__TOC__
-==Reference==
+</StructureSection>
-<ref group="xtra">PMID:010331865</ref><references group="xtra"/><references/>
 [[Category: Lysinibacillus sphaericus]]
 [[Category: Penicillin amidase]]
-[[Category: Brannigan, J A.]]
+[[Category: Brannigan, J A]]
-[[Category: Dauter, Z.]]
+[[Category: Dauter, Z]]
-[[Category: Dodson, E J.]]
+[[Category: Dodson, E J]]
-[[Category: Dodson, G G.]]
+[[Category: Dodson, G G]]
-[[Category: Mcvey, C E.]]
+[[Category: Mcvey, C E]]
-[[Category: Pundle, A V.]]
+[[Category: Pundle, A V]]
-[[Category: Rao, K N.]]
+[[Category: Rao, K N]]
-[[Category: Sivaraman, H.]]
+[[Category: Sivaraman, H]]
-[[Category: Suresh, C G.]]
+[[Category: Suresh, C G]]
-[[Category: Verma, C S.]]
+[[Category: Verma, C S]]
 [[Category: Amidohydrolase]]
 [[Category: Hydrolase]]
 [[Category: Ntn hydrolase]]
 [[Category: Penicillin v acylase]]