2jq7: Difference between revisions

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[[Image:2jq7.gif|left|200px]]<br /><~~applet load~~=~~"2jq7" size~~=~~"350" color~~=~~"white" frame~~=~~"true" align~~=~~"right" spinBox~~=~~"true"~~

[[Image:2jq7.gif|left|200px]]

~~caption~~=~~"2jq7"~~ />

'''Model for thiostrepton binding to the ribosomal L11-RNA'''~~<br />~~

{{Structure

|PDB= 2jq7 |SIZE=350|CAPTION= <scene name='initialview01'>2jq7</scene>

|SITE=

|LIGAND= <scene name='pdbligand=TZO:1,3-THIAZOLE-4-CARBOXYLIC+ACID'>TZO</scene>, <scene name='pdbligand=TZO:1,3-THIAZOLE-4-CARBOXYLIC+ACID'>TZO</scene>, <scene name='pdbligand=TZO:1,3-THIAZOLE-4-CARBOXYLIC+ACID'>TZO</scene>, <scene name='pdbligand=QUA:8-HYDROXY-4-(1-HYDROXYETHYL)QUINOLINE-2-CARBOXYLIC+ACID'>QUA</scene> and <scene name='pdbligand=XBB:(3S)-2,3,4,5-TETRAHYDROPYRIDIN-3-AMINE'>XBB</scene>

|ACTIVITY=

|GENE= rplK ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2336 Thermotoga maritima])

}}

'''Model for thiostrepton binding to the ribosomal L11-RNA'''

==Overview==

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==About this Structure==

2JQ7 is a [~~http://en.wikipedia.org/wiki/Single_protein~~ Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Streptomyces_azureus Streptomyces azureus] and [http://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima] with <scene name='pdbligand=TZO:'>TZO</scene>, <scene name='pdbligand=TZO:'>TZO</scene>, <scene name='pdbligand=TZO:'>TZO</scene>, <scene name='pdbligand=QUA:'>QUA</scene> and <scene name='pdbligand=XBB:'>XBB</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. This structure supersedes the now removed PDB entry 2NYO. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JQ7 OCA].

2JQ7 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Streptomyces_azureus Streptomyces azureus] and [http://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. This structure supersedes the now removed PDB entry 2NYO. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JQ7 OCA].

==Reference==

L11 domain rearrangement upon binding to RNA and thiostrepton studied by NMR spectroscopy., Jonker HR, Ilin S, Grimm SK, Wohnert J, Schwalbe H, Nucleic Acids Res. 2007;35(2):441-54. Epub 2006 Dec 14. PMID:[http://~~ispc~~.~~weizmann~~.ac.~~il/~~/~~pmbin~~/~~getpm?pmid=~~17169991 17169991]

L11 domain rearrangement upon binding to RNA and thiostrepton studied by NMR spectroscopy., Jonker HR, Ilin S, Grimm SK, Wohnert J, Schwalbe H, Nucleic Acids Res. 2007;35(2):441-54. Epub 2006 Dec 14. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/17169991 17169991]

[[Category: Single protein]]

[[Category: Streptomyces azureus]]

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[[Category: thiostrepton]]

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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 17:44:09 2008''

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@@ Line 1: / Line 1: @@
-[[Image:2jq7.gif|left|200px]]<br /><applet load="2jq7" size="350" color="white" frame="true" align="right" spinBox="true"
+[[Image:2jq7.gif|left|200px]]
-caption="2jq7" />
-'''Model for thiostrepton binding to the ribosomal L11-RNA'''<br />
+ {{Structure
+|PDB= 2jq7 |SIZE=350|CAPTION= <scene name='initialview01'>2jq7</scene>
+|SITE=
+|LIGAND= <scene name='pdbligand=TZO:1,3-THIAZOLE-4-CARBOXYLIC+ACID'>TZO</scene>, <scene name='pdbligand=TZO:1,3-THIAZOLE-4-CARBOXYLIC+ACID'>TZO</scene>, <scene name='pdbligand=TZO:1,3-THIAZOLE-4-CARBOXYLIC+ACID'>TZO</scene>, <scene name='pdbligand=QUA:8-HYDROXY-4-(1-HYDROXYETHYL)QUINOLINE-2-CARBOXYLIC+ACID'>QUA</scene> and <scene name='pdbligand=XBB:(3S)-2,3,4,5-TETRAHYDROPYRIDIN-3-AMINE'>XBB</scene>
+|ACTIVITY=
+|GENE= rplK ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2336 Thermotoga maritima])
+}}
+'''Model for thiostrepton binding to the ribosomal L11-RNA'''
 ==Overview==
@@ Line 7: / Line 16: @@
 ==About this Structure==
-JQ7 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Streptomyces_azureus Streptomyces azureus] and [http://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima] with <scene name='pdbligand=TZO:'>TZO</scene>, <scene name='pdbligand=TZO:'>TZO</scene>, <scene name='pdbligand=TZO:'>TZO</scene>, <scene name='pdbligand=QUA:'>QUA</scene> and <scene name='pdbligand=XBB:'>XBB</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. This structure supersedes the now removed PDB entry 2NYO. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JQ7 OCA].
+JQ7 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Streptomyces_azureus Streptomyces azureus] and [http://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. This structure supersedes the now removed PDB entry 2NYO. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JQ7 OCA].
 ==Reference==
-L11 domain rearrangement upon binding to RNA and thiostrepton studied by NMR spectroscopy., Jonker HR, Ilin S, Grimm SK, Wohnert J, Schwalbe H, Nucleic Acids Res. 2007;35(2):441-54. Epub 2006 Dec 14. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=17169991 17169991]
+L11 domain rearrangement upon binding to RNA and thiostrepton studied by NMR spectroscopy., Jonker HR, Ilin S, Grimm SK, Wohnert J, Schwalbe H, Nucleic Acids Res. 2007;35(2):441-54. Epub 2006 Dec 14. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/17169991 17169991]
 [[Category: Single protein]]
 [[Category: Streptomyces azureus]]
@@ Line 29: / Line 38: @@
 [[Category: thiostrepton]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 18:05:05 2008''
+''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 17:44:09 2008''