2q4d: Difference between revisions

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[[Image:2q4d.jpg|left|200px]]~~<br /><applet load~~="2q4d~~" size~~="350~~" color~~=~~"white" frame~~=~~"true" align="right" spinBox="true"~~

[[Image:2q4d.jpg|left|200px]]

~~caption="~~2q4d, resolution 2.152Å" />

'''Ensemble refinement of the crystal structure of a lysine decarboxylase-like protein from Arabidopsis thaliana gene At5g11950'''~~<br />~~

{{Structure

|PDB= 2q4d |SIZE=350|CAPTION= <scene name='initialview01'>2q4d</scene>, resolution 2.152Å

|SITE=

|LIGAND= <scene name='pdbligand=NO3:NITRATE+ION'>NO3</scene> and <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>

|ACTIVITY=

|GENE= AT5G11950, F14F18.120 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=3702 Arabidopsis thaliana])

}}

'''Ensemble refinement of the crystal structure of a lysine decarboxylase-like protein from Arabidopsis thaliana gene At5g11950'''

==Overview==

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==About this Structure==

2Q4D is a [~~http://en.wikipedia.org/wiki/Single_protein~~ Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana~~] with <scene name='pdbligand=NO3:'>NO3</scene> and <scene name='pdbligand=EDO:'>EDO</scene> as [http://en.wikipedia.org/wiki/ligands ligands~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Q4D OCA].

2Q4D is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Q4D OCA].

==Reference==

Ensemble refinement of protein crystal structures: validation and application., Levin EJ, Kondrashov DA, Wesenberg GE, Phillips GN Jr, Structure. 2007 Sep;15(9):1040-52. PMID:[http://~~ispc~~.~~weizmann~~.ac.~~il/~~/~~pmbin~~/~~getpm?pmid=~~17850744 17850744]

Ensemble refinement of protein crystal structures: validation and application., Levin EJ, Kondrashov DA, Wesenberg GE, Phillips GN Jr, Structure. 2007 Sep;15(9):1040-52. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/17850744 17850744]

[[Category: Arabidopsis thaliana]]

[[Category: Single protein]]

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[[Category: NO3]]

[[Category: at5g11950]]

[[Category: center for eukaryotic structural ~~genomics~~]]

[[Category: center for eukaryotic structural genomic]]

[[Category: cesg]]

[[Category: ensemble refinement]]

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[[Category: psi]]

[[Category: refinement methodology development]]

[[Category: structural ~~genomics~~]]

[[Category: structural genomic]]

[[Category: unknown function]]

''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu ~~Feb 21~~ 18:35:52 2008''

''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 18:21:31 2008''

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@@ Line 1: / Line 1: @@
-[[Image:2q4d.jpg|left|200px]]<br /><applet load="2q4d" size="350" color="white" frame="true" align="right" spinBox="true"
+[[Image:2q4d.jpg|left|200px]]
-caption="2q4d, resolution 2.152&Aring;" />
-'''Ensemble refinement of the crystal structure of a lysine decarboxylase-like protein from Arabidopsis thaliana gene At5g11950'''<br />
+ {{Structure
+|PDB= 2q4d |SIZE=350|CAPTION= <scene name='initialview01'>2q4d</scene>, resolution 2.152&Aring;
+|SITE=
+|LIGAND= <scene name='pdbligand=NO3:NITRATE+ION'>NO3</scene> and <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>
+|ACTIVITY=
+|GENE= AT5G11950, F14F18.120 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=3702 Arabidopsis thaliana])
+}}
+'''Ensemble refinement of the crystal structure of a lysine decarboxylase-like protein from Arabidopsis thaliana gene At5g11950'''
 ==Overview==
@@ Line 7: / Line 16: @@
 ==About this Structure==
-Q4D is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana] with <scene name='pdbligand=NO3:'>NO3</scene> and <scene name='pdbligand=EDO:'>EDO</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Q4D OCA].
+Q4D is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Q4D OCA].
 ==Reference==
-Ensemble refinement of protein crystal structures: validation and application., Levin EJ, Kondrashov DA, Wesenberg GE, Phillips GN Jr, Structure. 2007 Sep;15(9):1040-52. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=17850744 17850744]
+Ensemble refinement of protein crystal structures: validation and application., Levin EJ, Kondrashov DA, Wesenberg GE, Phillips GN Jr, Structure. 2007 Sep;15(9):1040-52. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/17850744 17850744]
 [[Category: Arabidopsis thaliana]]
 [[Category: Single protein]]
@@ Line 21: / Line 30: @@
 [[Category: NO3]]
 [[Category: at5g11950]]
-[[Category: center for eukaryotic structural genomics]]
+[[Category: center for eukaryotic structural genomic]]
 [[Category: cesg]]
 [[Category: ensemble refinement]]
@@ Line 28: / Line 37: @@
 [[Category: psi]]
 [[Category: refinement methodology development]]
-[[Category: structural genomics]]
+[[Category: structural genomic]]
 [[Category: unknown function]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 18:35:52 2008''
+''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 18:21:31 2008''