Sandbox Reserved 824: Difference between revisions

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*'''Signal peptide binding'''  
*'''Signal peptide binding'''  


The signal peptide binds SRP54M in an <scene name='56/568022/Hsrp54m_groove/1'>hydrophobic groove</scene> formed by helices 2, 3 and 4 as well as the loop 349-365 (17 aminoacids) previously mentioned.
The signal peptide binds SRP54M in an <scene name='56/568022/Hsrp54m_groovev2/1'>hydrophobic groove</scene> formed by helices 2, 3 and 4 as well as the loop 349-365 (17 aminoacids) previously mentioned.
These structures circumscribe a deep elongated hydrophobic groove matching the shape and chemical properties of known signal peptides.
These structures circumscribe a deep elongated hydrophobic groove matching the shape and chemical properties of known signal peptides.


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<scene name='56/568022/Hsrp54m_phe355_and_phe359/1'>Phe355 and Phe359</scene>
<scene name='56/568022/Hsrp54m_phe355_and_phe359/1'>Phe355 and Phe359</scene>
<scene name='56/568022/Hsrp54m_arg402_and_arg405/1'>Arg402 and Arg405</scene>
<scene name='56/568022/Hsrp54m_arg402_and_arg405/1'>Arg402 and Arg405</scene>
<scene name='56/568022/Hsrp54m_groovev2/1'>hydrophobic groovev2</scene>