Hemoglobin 3D structures: Difference between revisions

===Hb α+β===

[[3mkb]] – Hb α+β – Mako shark<br />

[[3mjp]] - Hb α+β - Japanese quail<br />

[[3mju]] - pHb α+β - pigeon<br />

[[3odq]], [[3kmf]], [[3dut]], [[2dn2]], [[1xxt]], [[1xz2]], [[1rq3]], [[1uiw]], [[1kd2]], [[1lfl]], [[1dke]], [[1qi8]], [[1a3n]], [[2hhd]], [[2hhe]], [[1hga]], [[1hgb]], [[1hgc]], [[2hhb]], [[3hhb]], [[4hhb]], [[2hbs]], [[1a3o]], [[1hbs]], [[3p5q]] - hHb α+β human<br />

[[2dxm]] - hHb α+β – neutron<br />

[[2h35]] - hHb α+β – NMR<br />

[[1fn3]], [[1nih]] - hHb α+β+ Ni containing heme<br />

[[1qsh]], [[1qsi]] - hHb α+β+ Mg containing heme<br />

[[2w6v]] - hHb α+β+Xe<br />

[[1xy0]], [[1xz5]], [[1xzu]], [[1xzv]], [[1y0a]], [[1y0c]], [[1y0t]], [[1y0w]], [[1y22]], [[1y2z]], [[1y31]], [[1y35]], [[1y45]], [[1y46]], [[1y4b]], [[1y4f]], [[1y4g]], [[1y4p]], [[1y4q]], [[1y4r]], [[1y4v]], [[1xye]], [[1xz4]], [[1xz7]], [[1y09]], [[1y0d]], [[1o1j]], [[1o1k]], [[1o1l]], [[1o1m]], [[1o1n]], [[1o1o]], [[1o1p]], [[1j7s]], [[1j7w]], [[1j7y]], [[1c7b]], [[1c7c]], [[1c7d]], [[1ch4]], [[1bzz]], [[6hbw]], [[1abw]], [[1a30]], [[1a00]], [[1a01]], [[1a0u]], [[1a0z]], [[1gbu]], [[1gli]], [[1hdb]], [[1dxt]], [[1dxu]], [[1dxv]], [[4mqh]], [[4mqi]] - hHb α+β (mutant)<br />

[[1bz0]] - hHb α+β  A<br />

[[1cbl]] - hHb α+β β4<br />

[[1bij]], [[1cls]] - hHb α+β A crosslinked<br />

[[1fdh]] - hHb α+β F<br />

[[2hbs]] - hHb α+β S (mutant)<br />

[[3b75]] - hHb α+β + glucose<br />

[[2d5z]], [[2d60]] - hHb α+β + L35<br />

[[2w72]] - Hb α+β (mutant)+Xe<br />

[[3ic0]], [[3ic2]], [[1qxd]], [[1qxe]], [[3r5i]] - hHb α+β + antisickling agent<br />

[[1k0y]] - hHb α+β + sites-linking compound<br />

[[1g9v]], [[4l7y]] - hHb α+β + allosteric effector<br />

[[1b86]], [[3wcp]] - hHb α+β  + phosphoglycerate<br />

[[3ia3]] - hHb α+α –Hb stabilizing protein<br />

[[1z8u]], [[1y01]] - hHb α+α–Hb stabilizing protein (mutant)<br />

[[3pi8]], [[3pi9]], [[3pia]], [[2qsp]], [[2qss]], [[1hda]] - bHb α+β bovine<br />

[[3pel]], [[3gou]], [[2qls]] - Hb α+β dog<br />

[[3ng6]], [[3nfe]], [[2aa1]] - TnHb α+β ''Trematomus newnesi''<br />

[[3hyu]] - GpHb α+β - Guinea pig<br />

[[3dht]] - rHb α+β – rat<br />

[[3gys]], [[3gqp]], [[3d4x]], [[3gqr]] - Hb α+β– cat<br />

[[3gdj]] - Hb α+β – camel<br />

[[3eu1]], [[3d1a]] - gHb α+β – goat<br />

[[3cy5]] - Hb α+β – buffalo<br />

[[2zlt]], [[2zlu]], [[2zlv]], [[2zlw]], [[2zlx]], [[1y8h]], [[1y8i]], [[1y8k]], [[1ns6]], [[1ibe]], [[2dhb]] - hoHb α+β – horse<br />

[[3k8b]] - tHb α+β<br />

[[3eok]] - Hb α+β – duck<br />

[[2zfb]] - Hb α+β - parrot<br />

[[3a59]] - osHb α+β – ostrich<br />

[[3hrw]] - mHb α+β – mouse<br />

[[3bom]] - trHb α+β - trout<br />

[[1out]] -trHb α+β (mutant)<br />

[[2peg]], [[2h8d]], [[2h8f]], [[1s5x]], [[1s5y]], [[1hbh]] - ErHb α+β - Emerald rockcod<br />

[[2c0k]] - Hb α+β – botfly<br />

[[1s0h]] - Hb α+β – donkey<br />

[[1wmu]], [[1v75]] - GgHb α+βD- Geochelone gigantean<br />

[[1v4w]], [[1v4x]] - BtHb α+β Bluefin tuna<br />

[[1it2]] - haHb α+β - hagfish<br />

[[1fhj]] - Hb α+β – wolf<br />

[[1hv4]] - BgHb α+β – Bar-headed goose<br />

[[1cg5]] - RsHb α+β – Red stingray<br />

[[1hbr]] - cHb α+β  D – chicken<br />

[[3bev]] – cHb α + MHC I + β-microglobulin<br />

[[3lhb]], [[1f5o]], [[1uc3]] - SlHb α+β – Sea lamprey<br />

[[1hds]] - Hb α+β S – white-tail deer<br />

[[4h2l]] - Hb α+β – deer mouse<br />

[[2b7h]] - Hb α+β - crab-eating fox<br />

[[3lqd]] - Hb α+β - European hare<br />

[[3at5]], [[3at6]] – Hb α+β – ''Podocnemis unifilis''<br />

[[3vre]], [[3vrg]] - maHb α+β – mammoth<br />

[[3wr1]] - Hb α+β -  cormorant<br />

===Hb  α+γ-2===

[[4mqj]] - hHb α+γ-2<br />

[[4mqk]] - hHb α+γ-2 (mutant)<br />

===hHb variants===

[[2yrs]] - hHb D Los Angeles α+β<br />

[[1r1y]] - hHb α+β Bassett<br />

[[1bab]] - hHb α+β Thionville<br />

[[1hba]], [[1hbb]] - hHb α+β Rothschild<br />

[[1cmy]] - hHb α+β Ypsilanti + CO<br />

===Hb ζ===

[[3w4u]] - hHb ζ+β<br />

===Hb===

[[2ksc]], 1mwb – Hb – Synechococcus – NMR<br />

[[2r50]] - Hb – corn<br />

[[2zwj]], [[1x3k]],  [[3arj]], [[3ark]], [[3arl]] -  TaHb V – ''Tokunagayusurika akamusi''<br />

[[1x46]] – TaHb VII<br />

[[3ogb]], [[2w6x]], [[2w6y]] – SwHb (mutant) – Sperm whale<br />

[[3lb1]], [[3lb2]], [[3lb3]], [[3lb4]] – dehaloperoxidase AoHb+inhibitor – ''Amphitrite ornate''<br />

[[3k3u]] - dehaloperoxidase AoHb (mutant)<br />

[[2xyk]] – 2-on-2 Hb – ''Agrobacterium tumefaciens''<br />

[[2hz1]], [[1rtx]] – SyHb – Synechocystis<br />

[[2hz3]] – SyHb (mutant)<br />

[[2gnv]], [[2gnw]] – rHb (mutant) – rice<br />

[[1d8u]] – rHb<br />

[[2bmm]] – Hb – ''Thermobifida fusca''<br />

[[2bk9]] – DmHb - ''Drosophila melanogaster''<br />

[[1kfr]], [[1h97]] – Hb – ''Paramphistomum epiclitum''<br />

[[1gcv]] – MgHb - ''Mustelus griseus''<br />

[[1vhb]] – VsHb – ''Vitreoscilla stercoraria''<br />

[[4vhb]] – VsHb + SCN<br />

[[1hlb]], [[1hlm]] – Hb – ''Caudina arenicola''<br />

[[2hbg]] - GdHb  – ''Glycera dibranchiata''<br />

[[3qqq]] – Hb non-symbiotic – Poison peach<br />

[[3qqr]] – Hb non-legume – ''Parasponia andersonii''   

===Mini Hb===

[[2xkg]], [[2xkh]], [[2xki]], [[2vyy]], [[2vyz]], [[4f68]], [[4f69]], [[4f6b]], [[4f6d]], [[4f6f]], [[4f6g]], [[4f6i]], [[4f6j]] – ClMiHb  (mutant) – ''Cerebratulus lacteus''<br />

[[4avd]] – ClMiHb + CO<br />

[[4ave]] – ClMiHb <br />

===Giant Hb===

[[1x9f]] – GiHb+CO – ''Lumbricus terrestris''<br />

[[2zs0]], [[2zs1]], [[2zfo]], [[2d2m]], [[2d2n]] – GiHb+O2 – Beard worm<br />

[[1yhu]] – GiHb+O2 – Tube worm<br />

===Truncated Hb===

[[1dlw]] – TrHb – ''Paramecium caudatum''<br />

[[2bkm]] - TrHb +O2 - ''Geobacillus stearothermophilus''<br />

[[1idr]] – MtTrHb + O2 - ''Mycobacterium tuberculosis''<br />

[[2ig3]] – TrHb III +CN – ''Campylobacter jejuni''<br />

[[1ux8]] – TrHb+CN – ''Bacillus subtilis''<br />

[[1rte]], [[1s56]] – MtTrHb + CN<br />

[[1s61]] – MtTrHb+ butyl-isocyanide<br />

[[1uvx]], [[1uvy]] – TrHb + CN – ''Chlamydomonas moewusii''<br />

[[3aq5]] – TpHb+ O2 – ''Tetrahymena pyriformis''<br />

[[3aq6]] – TpHb III<br />

[[3aq7]], [[3aq8]] - TpHb III (mutant

===MetHb α+β===

[[3gqg]] - roMetHb  α+β<br />

[[3dhr]] - pMetHb α+β<br />

[[3hf4]] - rMetHb α+β<br />

[[2ri4]] - gMetHb α+β<br />

[[2r1h]] - trMetHb α+β<br />

[[1ns9]], [[2mhb]] - hoMetHb α+β<br />

[[2qu0]] - MetHb α+β – sheep<br />

[[2pgh]] - MetHb α+β - pig<br />

[[3bj1]], [[3bj2]], [[3bj3]], [[1xq5]] - MetHb α+β – yellow perch<br />

[[2hz2]] – SyMetHb (mutant)<br />

[[1dtm]], [[1duo]] - SwMdetHb (mutant) + methylimidazole<br />

[[1duk]] - SwMdetHb<br />

[[1jy7]], [[1bz1]] - hMetHb α+β<br />

[[1vwt]] - hMetHb α+β (mutant)<br />

[[1c40]] - BgMetHb α+β<br />

[[1moh]] - LpMetHb + H2S - ''Lucina pectinata''<br />

[[1flp]], [[3pi1]], [[3pi2]], [[3pi3]], [[3pi4]] – LpMetHb<br />

===LegHb===

[[1lh1]], [[1lh2]], [[1lh3]], [[1lh5]], [[1lh6]], [[1lh7]], [[2lh1]], [[2lh2]], [[2lh3]], [[2lh5]], [[2lh6]], [[2lh7]], [[1gdj]] – LlLegHb – ''Lupinus luteus''<br />

[[2gdm]] – LlLegHb + O2<br />

[[1gdi]] – LlLegHb + CO<br />

[[1gdl]] – LlLegHb + NO<br />

[[1gdk]] – LlLegHb + isoquinoline<br />

[[1bin]] – SoLegHb – Soybean<br />

[[1fsl]] – SoLegHb + nicotinate

===Hb α+β + CO===

[[3gkv]] - roHb α+β + CO – rockcod<br />

[[3d1k]], [[1la6]], [[1t1n]] - TnHb α+β + CO<br />

[[3d17]], [[1yzi]], [[1j3y]], [[1j3z]], [[1j40]], [[1j41]], [[1ljw]], [[1ird]], [[1bbb]], [[1hco]], [[2hco]], [[2dn3]], [[3s65]]  - hHb α+β + CO<br />

[[1mko]] - hHb α+β A + CO<br />

[[1cbm]] - hHb α+β β4 + CO<br />

[[1nej]] - hHb α+β S + CO<br />

[[1m9p]] - hHb α+β C + CO<br />

[[1coh]] - - hHb α+β Co containing heme + CO<br />

[[1hab]], [[1hac]], [[1sdk]], [[1sdl]] - hHb α+β A crosslinked + CO<br />

[[3nl7]], [[3nml]], [[3nmm]], [[1yvq]], [[1yvt]], [[1yff]], [[1aj9]], [[1rvw]], [[3qjb]], [[3qjc]], [[3qjd]], [[3qje]], [[3s66]], [[4mqc]], [[4mqg]] - hHb α+β (mutant) + CO<br />

[[1k1k]] - hHb α+β C (mutant) + CO<br />

[[1r1x]] - hHb α+β Bassett (mutant) + CO<br />

[[1i3d]] - hHb α+β Bart’s + CO<br />

[[1a9w]] - hHb α+β Gower II + CO<br />

[[1iwh]] - hoHb α+β +CO<br />

[[2d5x]] - hoHb α+β + CO + L35<br />

[[3hxn]] - hHb α+β +CO+inositol hexakisphosphate<br />

[[1jeb]] – hHb/mHb α+β +CO<br />

[[2z6n]] - GgHb α+β +CO<br />

[[1v4u]] - BtHb α+β<br />

[[3a9m]], [[3a5a]], [[3a5b]], [[3a5g]] – TaHb V+CO<br />

[[1it3]] - haHb α+β +CO<br />

[[1fsx]], [[1g08]], [[1g09]], [[1g0a]], [[1g0b]] - bHb α+β +CO<br />

[[1gcw]] – MgHb + CO<br />

[[1f5p]] – SlHb V + CO<br />

[[1vre]], [[1vrf]] - GdHb  IV+ CO – NMR<br />

[[1hbg]], [[1hbg]] – GdHb + CO<br />

[[1cg8]] - RsHb α+β  + CO<br />

[[1spg]] - Hb α+β + CO - Spot croaker<br />

[[1ouu]] - trHb α+β (mutant) + CO<br />

[[1pbx]] - ErHb α+β+ CO<br />

[[3vrf]] - maHb α+β + CO<br />

[[4esa]] - Hb α+β + CO – ''Eleginops maclovinus''<br />

[[4iro]] – TbHb α+β + CO – ''Trematomus bernacchii''<br />

===Hb α+β + O2===

[[3fs4]] - osHb α+β + O2<br />

[[2r80]] - pHb α+β +O2<br />

[[2rao]] - Hb α+β + O2 – rabbit<br />

[[2vyw]] – Hb+O2 – ''Fasciola Hepatica''<br />

[[2qmb]] - tHb α+β +O2 - turkey<br />

[[3a0g]] - GpHb α+β + O2<br />

[[3fh9]] - Hb α+β +O2 – Indian flying fox<br />

[[3bcq]] - Hb α+β +O2 – ''Brycon cephalus''<br />

[[2olp]] - LpHb+O2<br />

[[3ciu]] - bHb α+β +O+glycosylation<br />

[[2dn1]], [[1lfq]], [[1lft]], [[1lfv]], [[1lfy]], [[1lfz]], [[1gzx]], [[1thb]], [[1hho]] – hHb α+β +O2<br />

[[1yeo]], [[1yh9]], [[1yhe]], [[1yhr]], [[1yie]], [[1yih]], [[1yen]], [[1yeq]], [[1yeu]], [[1yev]], [[1yg5]], [[1ygd]], [[1ygf]], [[1y8w]], [[1ydz]], [[1ye0]], [[1ye1]], [[1ye2]], [[1y7z]], [[1y83]], [[1y85]], [[1y5f]], [[1y5j]], [[1y5k]], [[1y7c]], [[1y7d]], [[1y7g]], [[1gbv]] - hHb α+β (mutant) + O2<br />

[[1faw]] - Hb α+β +O2 – Grayleg goose<br />

[[1a4f]] – BgHb α+β +O2<br />

[[1qpw]] - pHb α+β +O2 - pig<br />

[[1v07]] – ClMiHb (mutant) + O2<br />

[[1kr7]] – ClMiHb + O2<br />

[[1ash]] – Hb + O2 – Pig roundworm<br />

[[3pt7]] - LpHb α+β +O2

===Hb α+β + CN===

[[2g3h]] – DmHb (mutant)+CN<br />

[[2oif]] - Hb+CN – barley<br />

[[1shr]], [[1si4]] - hHb α+β + CN<br />

[[2hbc]], [[2hbd]], [[2hbe]], [[2hbf]] - hHb α+β A + isocyanide compound<br />

[[1nqp]] - hHb α+β E + CN<br />

[[1o1i]], [[1aby]] - hHb α+β (mutant)+CN<br />

[[1i3e]] - hMetHb α+β Bart’s + N3<br />

[[1s69]] – SyHb + CN<br />

[[1s6a]] – SyHb + N3<br />

[[1jl6]], [[1jf4]] – GdHb  IV+ CN<br />

[[1jl7]], [[1jf3]] – GdHb III + CN<br />

[[1dly]] – Hb + CN – ''Chlamydomonas eugametos''<br />

[[1b0b]], [[1ebt]], [[3pt8]] – LpHb + CN<br />

[[4vhb]] – VsHb + SCN<br />

[[3vhb]] – VsHb + imidazole<br />

[[2vhb]] – VsHb + N3<br />

[[1ebc]] – SwMdetHb + CN<br />

[[1ith]] – Hb + CN – ''Urechis caupo''<br />

[[2lhb]] – slHb V + CN<br />

===Hb α+β + NO2===

[[3d7o]], [[3onz]], [[3oo4]], [[3oo5]] - hHb α+β+NO2<br />

[[1buw]] - hHb α+β+ S-nitroso-nitrosyl<br />

[[1rqa]] - hHb α+β (mutant) + NO<br />

[[1rps]], [[1rq4]] - hHb α+β+NO<br />

===Hb + NO===

[[4g51]] – TbHb α+β + NO <br />

===Dimeric Hb (Globin-1)===

[[2z85]], [[2aur]], [[2av3]], [[1jzk]], [[1jzm]], [[4hbi]], [[6hbi]], [[2grf]], [[3uhk]], [[3uhn]], [[3uhq]], [[3uhr]], [[3uhs]], [[3uht]], [[3uhu]], [[3uhv]], [[3uhw]], [[3uhx]], [[3uhy]], [[3uhz]], [[3ui0]], [[3ugy]]- AcHb (mutant) - Ark clam<br />

[[4sdh]] - AcHb α+β<br />

[[3g46]], [[3g4q]], [[3g4r]], [[3g4u]], [[3g4v]], [[3g4w]], [[3g4y]], [[3g52]], [[3g53]], [[1sct]], [[3sdh]], [[1nxf]], [[3uhd]], [[1nw1]], [[1nwn]] – AcHb  +CO<br />

[[2r4w]], [[2r4x]], [[2r4y]], [[2r4z]], [[2z8a]], [[2grh]], [[2auo]], [[2aup]], [[2auq]], [[2av0]], [[1jzl]], [[1jwn]], [[5hbi]], [[7hbi]], [[1grz]], [[3ugz]], [[3uh3]], [[3uh5]], [[3uh6]], [[3uh7]], [[3uhb]], [[3uhc]], [[3uhd]], [[3uhe]], [[3uhg]], [[3uhh]], [[3uhi]] – AcHb  (mutant) + CO<br />

[[1hbi]] - AcHb +O2<br />

[[3zhw]] – EcHb - ''Escherichia coli''<br />

===Tetrameric Hb (Globin-2)===

[[4hrt]] – globin-2 α+ Hb β - Inequivalve Ark  

===Hb complex with protein===

[[3ovu]] – hHb α + α-Hb-stabilizing protein + iron-regulated surface determinant protein H<br />

[[3szk]], [[3s48]] - hHb α + iron-regulated surface determinant protein H<br />

[[4fc3]], [[4ij2]] - hHb α+β + iron-regulated surface determinant protein H<br />

[[4f4o]] - pHb α+β + haptoglobin

===Flavohemoglobin===

[[4g1v]] – yFHb - yeast<br />

[[4g1b]] – yFHb + econazole <br />

[[1cqx]] – CnFhb – ''Cupriavidus necator''<br />

[[1gvh]] – EcFhb <br />

[[3ozu]] – CnFhb + miconazole<br />

[[3ozv]] – CnFhb + econazole<br />

[[3ozw]] – CnFhb + ketoconazole<br />

[[4eh1]] – Fhb + FAD – ''Vibrio cholerae''<br />