3bnh: Difference between revisions

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New page: left|200px<br /><applet load="3bnh" size="350" color="white" frame="true" align="right" spinBox="true" caption="3bnh, resolution 1.75Å" /> '''W. succinogenes NrfA...
 
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[[Image:3bnh.jpg|left|200px]]<br /><applet load="3bnh" size="350" color="white" frame="true" align="right" spinBox="true"
[[Image:3bnh.jpg|left|200px]]
caption="3bnh, resolution 1.75&Aring;" />
 
'''W. succinogenes NrfA Y218F Nitrite Complex'''<br />
{{Structure
|PDB= 3bnh |SIZE=350|CAPTION= <scene name='initialview01'>3bnh</scene>, resolution 1.75&Aring;
|SITE= <scene name='pdbsite=AC1:No2+Binding+Site+For+Residue+A+1'>AC1</scene>, <scene name='pdbsite=AC2:Ca+Binding+Site+For+Residue+A+508'>AC2</scene>, <scene name='pdbsite=AC3:Act+Binding+Site+For+Residue+A+2'>AC3</scene>, <scene name='pdbsite=AC4:Act+Binding+Site+For+Residue+A+3'>AC4</scene>, <scene name='pdbsite=AC5:So4+Binding+Site+For+Residue+A+509'>AC5</scene>, <scene name='pdbsite=AC6:Y1+Binding+Site+For+Residue+A+515'>AC6</scene>, <scene name='pdbsite=AC7:Y1+Binding+Site+For+Residue+A+516'>AC7</scene>, <scene name='pdbsite=AC8:Y1+Binding+Site+For+Residue+A+517'>AC8</scene>, <scene name='pdbsite=AC9:Hem+Binding+Site+For+Residue+A+510'>AC9</scene>, <scene name='pdbsite=BC1:Hem+Binding+Site+For+Residue+A+511'>BC1</scene>, <scene name='pdbsite=BC2:Hem+Binding+Site+For+Residue+A+512'>BC2</scene>, <scene name='pdbsite=BC3:Hem+Binding+Site+For+Residue+A+513'>BC3</scene> and <scene name='pdbsite=BC4:Hem+Binding+Site+For+Residue+A+514'>BC4</scene>
|LIGAND= <scene name='pdbligand=NO2:NITRITE+ION'>NO2</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=Y1:YTTRIUM+ION'>Y1</scene> and <scene name='pdbligand=HEM:PROTOPORPHYRIN IX CONTAINING FE'>HEM</scene>
|ACTIVITY= [http://en.wikipedia.org/wiki/Nitrite_reductase_(cytochrome;_ammonia-forming) Nitrite reductase (cytochrome; ammonia-forming)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.7.2.2 1.7.2.2]
|GENE= nrfA Y218F ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=844 Wolinella succinogenes])
}}
 
'''W. succinogenes NrfA Y218F Nitrite Complex'''
 


==Overview==
==Overview==
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==About this Structure==
==About this Structure==
3BNH is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Wolinella_succinogenes Wolinella succinogenes] with <scene name='pdbligand=NO2:'>NO2</scene>, <scene name='pdbligand=CA:'>CA</scene>, <scene name='pdbligand=ACT:'>ACT</scene>, <scene name='pdbligand=SO4:'>SO4</scene>, <scene name='pdbligand=Y1:'>Y1</scene> and <scene name='pdbligand=HEM:'>HEM</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Active as [http://en.wikipedia.org/wiki/Nitrite_reductase_(cytochrome;_ammonia-forming) Nitrite reductase (cytochrome; ammonia-forming)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.7.2.2 1.7.2.2] Known structural/functional Sites: <scene name='pdbsite=AC1:No2+Binding+Site+For+Residue+A+1'>AC1</scene>, <scene name='pdbsite=AC2:Ca+Binding+Site+For+Residue+A+508'>AC2</scene>, <scene name='pdbsite=AC3:Act+Binding+Site+For+Residue+A+2'>AC3</scene>, <scene name='pdbsite=AC4:Act+Binding+Site+For+Residue+A+3'>AC4</scene>, <scene name='pdbsite=AC5:So4+Binding+Site+For+Residue+A+509'>AC5</scene>, <scene name='pdbsite=AC6:Y1+Binding+Site+For+Residue+A+515'>AC6</scene>, <scene name='pdbsite=AC7:Y1+Binding+Site+For+Residue+A+516'>AC7</scene>, <scene name='pdbsite=AC8:Y1+Binding+Site+For+Residue+A+517'>AC8</scene>, <scene name='pdbsite=AC9:Hem+Binding+Site+For+Residue+A+510'>AC9</scene>, <scene name='pdbsite=BC1:Hem+Binding+Site+For+Residue+A+511'>BC1</scene>, <scene name='pdbsite=BC2:Hem+Binding+Site+For+Residue+A+512'>BC2</scene>, <scene name='pdbsite=BC3:Hem+Binding+Site+For+Residue+A+513'>BC3</scene> and <scene name='pdbsite=BC4:Hem+Binding+Site+For+Residue+A+514'>BC4</scene>. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BNH OCA].  
3BNH is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Wolinella_succinogenes Wolinella succinogenes]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BNH OCA].  


==Reference==
==Reference==
Binding and Reduction of Sulfite by Cytochrome c Nitrite Reductase(,)., Lukat P, Rudolf M, Stach P, Messerschmidt A, Kroneck PM, Simon J, Einsle O, Biochemistry. 2008 Feb 19;47(7):2080-2086. Epub 2008 Jan 18. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=18201106 18201106]
Binding and Reduction of Sulfite by Cytochrome c Nitrite Reductase(,)., Lukat P, Rudolf M, Stach P, Messerschmidt A, Kroneck PM, Simon J, Einsle O, Biochemistry. 2008 Feb 19;47(7):2080-2086. Epub 2008 Jan 18. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/18201106 18201106]
[[Category: Nitrite reductase (cytochrome; ammonia-forming)]]
[[Category: Nitrite reductase (cytochrome; ammonia-forming)]]
[[Category: Single protein]]
[[Category: Single protein]]
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[[Category: transport]]
[[Category: transport]]


''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 27 07:59:52 2008''
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 19:00:10 2008''