2pyo: Difference between revisions

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[[Image:2pyo.gif|left|200px]]<br /><applet load="2pyo" size="350" color="white" frame="true" align="right" spinBox="true"
[[Image:2pyo.gif|left|200px]]
caption="2pyo, resolution 2.430&Aring;" />
 
'''Drosophila nucleosome core'''<br />
{{Structure
|PDB= 2pyo |SIZE=350|CAPTION= <scene name='initialview01'>2pyo</scene>, resolution 2.430&Aring;
|SITE= <scene name='pdbsite=AC1:Mn+Binding+Site+For+Residue+E+1002'>AC1</scene>, <scene name='pdbsite=AC2:Mn+Binding+Site+For+Residue+J+1003'>AC2</scene>, <scene name='pdbsite=AC3:Mn+Binding+Site+For+Residue+J+1009'>AC3</scene>, <scene name='pdbsite=AC4:Mn+Binding+Site+For+Residue+I+1011'>AC4</scene>, <scene name='pdbsite=AC5:Mn+Binding+Site+For+Residue+I+1012'>AC5</scene>, <scene name='pdbsite=AC6:Mn+Binding+Site+For+Residue+I+1013'>AC6</scene>, <scene name='pdbsite=AC7:Mn+Binding+Site+For+Residue+J+1014'>AC7</scene>, <scene name='pdbsite=AC8:Cl+Binding+Site+For+Residue+H+1015'>AC8</scene>, <scene name='pdbsite=AC9:Cl+Binding+Site+For+Residue+D+1016'>AC9</scene>, <scene name='pdbsite=BC1:Cl+Binding+Site+For+Residue+A+1017'>BC1</scene> and <scene name='pdbsite=BC2:Cl+Binding+Site+For+Residue+E+1018'>BC2</scene>
|LIGAND= <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene> and <scene name='pdbligand=CL:CHLORIDE ION'>CL</scene>
|ACTIVITY=
|GENE= His3 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=7227 Drosophila melanogaster]), His4, H4 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=7227 Drosophila melanogaster]), His2A, H2a ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=7227 Drosophila melanogaster]), His2B ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=7227 Drosophila melanogaster])
}}
 
'''Drosophila nucleosome core'''
 


==Overview==
==Overview==
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==About this Structure==
==About this Structure==
2PYO is a [http://en.wikipedia.org/wiki/Protein_complex Protein complex] structure of sequences from [http://en.wikipedia.org/wiki/Drosophila_melanogaster Drosophila melanogaster] and [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] with <scene name='pdbligand=MN:'>MN</scene> and <scene name='pdbligand=CL:'>CL</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Known structural/functional Sites: <scene name='pdbsite=AC1:Mn+Binding+Site+For+Residue+E+1002'>AC1</scene>, <scene name='pdbsite=AC2:Mn+Binding+Site+For+Residue+J+1003'>AC2</scene>, <scene name='pdbsite=AC3:Mn+Binding+Site+For+Residue+J+1009'>AC3</scene>, <scene name='pdbsite=AC4:Mn+Binding+Site+For+Residue+I+1011'>AC4</scene>, <scene name='pdbsite=AC5:Mn+Binding+Site+For+Residue+I+1012'>AC5</scene>, <scene name='pdbsite=AC6:Mn+Binding+Site+For+Residue+I+1013'>AC6</scene>, <scene name='pdbsite=AC7:Mn+Binding+Site+For+Residue+J+1014'>AC7</scene>, <scene name='pdbsite=AC8:Cl+Binding+Site+For+Residue+H+1015'>AC8</scene>, <scene name='pdbsite=AC9:Cl+Binding+Site+For+Residue+D+1016'>AC9</scene>, <scene name='pdbsite=BC1:Cl+Binding+Site+For+Residue+A+1017'>BC1</scene> and <scene name='pdbsite=BC2:Cl+Binding+Site+For+Residue+E+1018'>BC2</scene>. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PYO OCA].  
2PYO is a [[Protein complex]] structure of sequences from [http://en.wikipedia.org/wiki/Drosophila_melanogaster Drosophila melanogaster] and [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PYO OCA].  


==Reference==
==Reference==
Structure of the Drosophila nucleosome core particle highlights evolutionary constraints on the H2A-H2B histone dimer., Clapier CR, Chakravarthy S, Petosa C, Fernandez-Tornero C, Luger K, Muller CW, Proteins. 2007 Oct 23;71(1):1-7. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=17957772 17957772]
Structure of the Drosophila nucleosome core particle highlights evolutionary constraints on the H2A-H2B histone dimer., Clapier CR, Chakravarthy S, Petosa C, Fernandez-Tornero C, Luger K, Muller CW, Proteins. 2007 Oct 23;71(1):1-7. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/17957772 17957772]
[[Category: Drosophila melanogaster]]
[[Category: Drosophila melanogaster]]
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
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[[Category: structural protein/dna complex]]
[[Category: structural protein/dna complex]]


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