3bof: Difference between revisions

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New page: left|200px<br /><applet load="3bof" size="350" color="white" frame="true" align="right" spinBox="true" caption="3bof, resolution 1.700Å" /> '''Cobalamin-dependent...
 
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[[Image:3bof.jpg|left|200px]]<br /><applet load="3bof" size="350" color="white" frame="true" align="right" spinBox="true"
[[Image:3bof.jpg|left|200px]]
caption="3bof, resolution 1.700&Aring;" />
 
'''Cobalamin-dependent methionine synthase (1-566) from Thermotoga maritima complexed with Zn2+ and Homocysteine'''<br />
{{Structure
|PDB= 3bof |SIZE=350|CAPTION= <scene name='initialview01'>3bof</scene>, resolution 1.700&Aring;
|SITE= <scene name='pdbsite=AC1:Zn+Binding+Site+For+Residue+A+701'>AC1</scene>, <scene name='pdbsite=AC2:Zn+Binding+Site+For+Residue+B+702'>AC2</scene>, <scene name='pdbsite=AC3:K+Binding+Site+For+Residue+A+703'>AC3</scene>, <scene name='pdbsite=AC4:K+Binding+Site+For+Residue+B+704'>AC4</scene>, <scene name='pdbsite=AC5:Yt3+Binding+Site+For+Residue+A+705'>AC5</scene>, <scene name='pdbsite=AC6:Hcs+Binding+Site+For+Residue+A+711'>AC6</scene> and <scene name='pdbsite=AC7:Hcs+Binding+Site+For+Residue+B+712'>AC7</scene>
|LIGAND= <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=YT3:YTTRIUM+(III)+ION'>YT3</scene> and <scene name='pdbligand=HCS:2-AMINO-4-MERCAPTO-BUTYRIC ACID'>HCS</scene>
|ACTIVITY= [http://en.wikipedia.org/wiki/Methionine_synthase Methionine synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.1.1.13 2.1.1.13]
|GENE=
}}
 
'''Cobalamin-dependent methionine synthase (1-566) from Thermotoga maritima complexed with Zn2+ and Homocysteine'''
 


==Overview==
==Overview==
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==About this Structure==
==About this Structure==
3BOF is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima] with <scene name='pdbligand=ZN:'>ZN</scene>, <scene name='pdbligand=K:'>K</scene>, <scene name='pdbligand=YT3:'>YT3</scene> and <scene name='pdbligand=HCS:'>HCS</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Active as [http://en.wikipedia.org/wiki/Methionine_synthase Methionine synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.1.1.13 2.1.1.13] Known structural/functional Sites: <scene name='pdbsite=AC1:Zn+Binding+Site+For+Residue+A+701'>AC1</scene>, <scene name='pdbsite=AC2:Zn+Binding+Site+For+Residue+B+702'>AC2</scene>, <scene name='pdbsite=AC3:K+Binding+Site+For+Residue+A+703'>AC3</scene>, <scene name='pdbsite=AC4:K+Binding+Site+For+Residue+B+704'>AC4</scene>, <scene name='pdbsite=AC5:Yt3+Binding+Site+For+Residue+A+705'>AC5</scene>, <scene name='pdbsite=AC6:Hcs+Binding+Site+For+Residue+A+711'>AC6</scene> and <scene name='pdbsite=AC7:Hcs+Binding+Site+For+Residue+B+712'>AC7</scene>. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BOF OCA].  
3BOF is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BOF OCA].  


==Reference==
==Reference==
Metal active site elasticity linked to activation of homocysteine in methionine synthases., Koutmos M, Pejchal R, Bomer TM, Matthews RG, Smith JL, Ludwig ML, Proc Natl Acad Sci U S A. 2008 Mar 4;105(9):3286-91. Epub 2008 Feb 22. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=18296644 18296644]
Metal active site elasticity linked to activation of homocysteine in methionine synthases., Koutmos M, Pejchal R, Bomer TM, Matthews RG, Smith JL, Ludwig ML, Proc Natl Acad Sci U S A. 2008 Mar 4;105(9):3286-91. Epub 2008 Feb 22. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/18296644 18296644]
[[Category: Methionine synthase]]
[[Category: Methionine synthase]]
[[Category: Single protein]]
[[Category: Single protein]]
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[[Category: zinc inversion]]
[[Category: zinc inversion]]


''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Fri Mar 14 09:38:48 2008''
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 19:00:17 2008''