3mm2: Difference between revisions
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== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[3mm2]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bjerkandera_adusta Bjerkandera adusta]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MM2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3MM2 FirstGlance]. <br> | <table><tr><td colspan='2'>[[3mm2]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bjerkandera_adusta Bjerkandera adusta]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MM2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3MM2 FirstGlance]. <br> | ||
</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CYN:CYANIDE+ION'>CYN</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>< | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CYN:CYANIDE+ION'>CYN</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr> | ||
<tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3mm1|3mm1]], [[3mm3|3mm3]]</td></tr> | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3mm1|3mm1]], [[3mm3|3mm3]]</td></tr> | ||
<tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">dyp ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=5331 Bjerkandera adusta])</td></tr> | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">dyp ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=5331 Bjerkandera adusta])</td></tr> | ||
<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Dye_decolorizing_peroxidase Dye decolorizing peroxidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.11.1.19 1.11.1.19] </span></td></tr> | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Dye_decolorizing_peroxidase Dye decolorizing peroxidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.11.1.19 1.11.1.19] </span></td></tr> | ||
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3mm2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3mm2 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3mm2 RCSB], [http://www.ebi.ac.uk/pdbsum/3mm2 PDBsum]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3mm2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3mm2 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3mm2 RCSB], [http://www.ebi.ac.uk/pdbsum/3mm2 PDBsum]</span></td></tr> | ||
<table> | </table> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
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The catalytic mechanism of dye-decolorizing peroxidase DyP may require the swinging movement of an aspartic acid residue.,Yoshida T, Tsuge H, Konno H, Hisabori T, Sugano Y FEBS J. 2011 Jul;278(13):2387-94. doi: 10.1111/j.1742-4658.2011.08161.x., Epub 2011 May 31. PMID:21569205<ref>PMID:21569205</ref> | The catalytic mechanism of dye-decolorizing peroxidase DyP may require the swinging movement of an aspartic acid residue.,Yoshida T, Tsuge H, Konno H, Hisabori T, Sugano Y FEBS J. 2011 Jul;278(13):2387-94. doi: 10.1111/j.1742-4658.2011.08161.x., Epub 2011 May 31. PMID:21569205<ref>PMID:21569205</ref> | ||
From | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
</div> | </div> | ||
== References == | == References == | ||
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[[Category: Bjerkandera adusta]] | [[Category: Bjerkandera adusta]] | ||
[[Category: Dye decolorizing peroxidase]] | [[Category: Dye decolorizing peroxidase]] | ||
[[Category: Sugano, Y | [[Category: Sugano, Y]] | ||
[[Category: Tsuge, H | [[Category: Tsuge, H]] | ||
[[Category: Yoshida, T | [[Category: Yoshida, T]] | ||
[[Category: Aspartic acid]] | [[Category: Aspartic acid]] | ||
[[Category: Beta barrel]] | [[Category: Beta barrel]] | ||
