3sdr: Difference between revisions
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== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[3sdr]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Abies_grandis Abies grandis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3SDR OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3SDR FirstGlance]. <br> | <table><tr><td colspan='2'>[[3sdr]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Abies_grandis Abies grandis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3SDR OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3SDR FirstGlance]. <br> | ||
</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=210:PAMIDRONATE'>210</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>< | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=210:PAMIDRONATE'>210</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr> | ||
<tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3sae|3sae]], [[3sdq|3sdq]], [[3sdt|3sdt]], [[3sdv|3sdv]], [[3sdu|3sdu]]</td></tr> | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3sae|3sae]], [[3sdq|3sdq]], [[3sdt|3sdt]], [[3sdv|3sdv]], [[3sdu|3sdu]]</td></tr> | ||
<tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ag1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=46611 Abies grandis])</td></tr> | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ag1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=46611 Abies grandis])</td></tr> | ||
<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Alpha-bisabolene_synthase Alpha-bisabolene synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.3.38 4.2.3.38] </span></td></tr> | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Alpha-bisabolene_synthase Alpha-bisabolene synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.3.38 4.2.3.38] </span></td></tr> | ||
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3sdr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3sdr OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3sdr RCSB], [http://www.ebi.ac.uk/pdbsum/3sdr PDBsum]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3sdr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3sdr OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3sdr RCSB], [http://www.ebi.ac.uk/pdbsum/3sdr PDBsum]</span></td></tr> | ||
<table> | </table> | ||
== Function == | |||
[[http://www.uniprot.org/uniprot/TPSD1_ABIGR TPSD1_ABIGR]] Involved in defensive oleoresin formation in conifers in response to insect attack or other injury. Involved in sesquiterpene (C15) olefins biosynthesis.<ref>PMID:9539701</ref> | |||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
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[[Category: Abies grandis]] | [[Category: Abies grandis]] | ||
[[Category: Alpha-bisabolene synthase]] | [[Category: Alpha-bisabolene synthase]] | ||
[[Category: Adams, P D | [[Category: Adams, P D]] | ||
[[Category: DeGiovanni, A | [[Category: DeGiovanni, A]] | ||
[[Category: Hadi, M Z | [[Category: Hadi, M Z]] | ||
[[Category: Keasling, J D | [[Category: Keasling, J D]] | ||
[[Category: McAndrew, R P | [[Category: McAndrew, R P]] | ||
[[Category: Peralta-Yahya, P P | [[Category: Peralta-Yahya, P P]] | ||
[[Category: Pereira, J H | [[Category: Pereira, J H]] | ||
[[Category: Lyase]] | [[Category: Lyase]] | ||
[[Category: Terpene synthase]] | [[Category: Terpene synthase]] | ||
Revision as of 22:08, 24 December 2014
Structure of a three-domain sesquiterpene synthase: a prospective target for advanced biofuels production
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